RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ZSWIM7Q19AV6 140 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 TRMT5Q32P41 509 aaKnown RBP12.41□□□□□ -0.42
UPF1-205ENST00000598209 MMEL1Q495T6 779 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 ZNF311Q5JNZ3 666 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 REP15Q6BDI9 236 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 REEP3Q6NUK4 255 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 VWA1Q6PCB0 445 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 GRINAQ7Z429 371 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 SNX32Q86XE0 403 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 ADGRG4Q8IZF6 3080 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 CPNE4Q96A23 557 aaPredicted RBP12.41□□□□□ -0.42
UPF1-205ENST00000598209 OR5B2Q96R09 309 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 SPATA9Q9BWV2 254 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 SRXN1Q9BYN0 137 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 ARMC7Q9H6L4 198 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 TIGARQ9NQ88 270 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 UNC79Q9P2D8 2635 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 FOXD3Q9UJU5 478 aaPredicted RBP12.41□□□□□ -0.42
UPF1-205ENST00000598209 PACSIN3Q9UKS6 424 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 CHST2Q9Y4C5 530 aa12.41□□□□□ -0.42
UPF1-205ENST00000598209 LOC100653049A0A140TA62 436 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 MRASO14807 208 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SLC22A2O15244 555 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SMNDC1O75940 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
UPF1-205ENST00000598209 KRT34O76011 436 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SLC6A2P23975 617 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 LSP1P33241 339 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 HTR3AP46098 478 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 CPA2P48052 419 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 GYS2P54840 703 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 CYLC2Q14093 348 aaPredicted RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 GUSBP1Q15486 140 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 ZNF239Q16600 458 aaKnown RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 CYP51A1Q16850 503 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SYT14P1Q58G82 188 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 COQ5Q5HYK3 327 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 ZNF550Q7Z398 422 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SPATA21Q7Z572 469 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 BTLAQ7Z6A9 289 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 LUZP2Q86TE4 346 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 KRT73Q86Y46 540 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 PTOV1Q86YD1 416 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 ZNF295-AS1Q8N0V1 137 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 HIPK4Q8NE63 616 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SLC25A43Q8WUT9 341 aaPredicted RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 ROBO4Q8WZ75 1007 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 STARD4Q96DR4 205 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 REXO5Q96IC2 774 aaKnown RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 ELAC2Q9BQ52 826 aaKnown RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 SLC39A3Q9BRY0 314 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 RBM24Q9BX46 236 aaKnown RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 ARMCX1Q9P291 453 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 CHRNA9Q9UGM1 479 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 CLEC4AQ9UMR7 237 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 SPIN1Q9Y657 262 aaPredicted RBP12.4□□□□□ -0.42
UPF1-205ENST00000598209 CELSR2Q9HCU4 2923 aa12.4□□□□□ -0.42
UPF1-205ENST00000598209 TMED7-TICAM2A0A0A6YYA0 188 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 MSTNO14793 375 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 CCDC22O60826 627 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 PLGP00747 810 aaPredicted RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 TFPIP10646 304 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 CCNA2P20248 432 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 TACR3P29371 465 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 AQP1P29972 269 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 ACAA2P42765 397 aaKnown RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 SLC1A3P43003 542 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 POLR2HP52434 150 aaKnown RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 RAC3P60763 192 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 RBBP4Q09028 425 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 SNTB1Q13884 538 aaKnown RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 NANOGP8Q6NSW7 305 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 FAM214BQ7L5A3 538 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 NET1Q7Z628 596 aaPredicted RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 SERPINA11Q86U17 422 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 ADGRG3Q86Y34 549 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 C11orf65Q8NCR3 313 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 LRRC58Q96CX6 371 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 GMPPAQ96IJ6 420 aaPredicted RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 SPATA5L1Q9BVQ7 753 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 FAM107BQ9H098 131 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 NSRP1Q9H0G5 558 aaKnown RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 KAT8Q9H7Z6 458 aaKnown RBP12.39□□□□□ -0.43
UPF1-205ENST00000598209 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 OSGIN1Q9UJX0 560 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 ANGPT4Q9Y264 503 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 TMED7Q9Y3B3 224 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
UPF1-205ENST00000598209 CENPEQ02224 2701 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 GMNCA6NCL1 334 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 A8MXE2 369 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 FXYD1O00168 92 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 FRS3O43559 492 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 SS18L1O75177 396 aaPredicted RBP12.38□□□□□ -0.43
UPF1-205ENST00000598209 NPPAP01160 153 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 PRG2P13727 222 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 DRD4P21917 467 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 PRKAR1BP31321 381 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 PEX19P40855 299 aa12.38□□□□□ -0.43
UPF1-205ENST00000598209 CTBP2P56545 445 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms