RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CYP4Z2PQ8N1L4 340 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC7A13Q8TCU3 470 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 GNPDA2Q8TDQ7 276 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 RNF138Q8WVD3 245 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ACOT11Q8WXI4 607 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ARSGQ96EG1 525 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 MPP4Q96JB8 637 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF597Q96LX8 424 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 FEVQ99581 238 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ZNF184Q99676 751 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ANGPTL4Q9BY76 406 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 SLC25A18Q9H1K4 315 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 GALNT9Q9HCQ5 603 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 KRCC1Q9NPI7 259 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 TIMMDC1Q9NPL8 285 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ANKRD10Q9NXR5 420 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 MED11Q9P086 117 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 LRFN1Q9P244 771 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 ICAM5Q9UMF0 924 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 MGAT4BQ9UQ53 548 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 LRRC42Q9Y546 428 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 CHCHD2Q9Y6H1 151 aaPredicted RBP11.9□□□□□ -0.5
SHKBP1-209ENST00000595803 A0A087WUU8 490 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 A0A0B4J2E0 115 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 A0A1B0GX12 115 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 C7orf72A4D263 438 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 ANKRD33BA6NCL7 494 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 ARRDC5A6NEK1 342 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 ANKUB1A6NFN9 424 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 FAM47E-STBD1D6RA91 191 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 CHP2O43745 196 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 SNX4O95219 450 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 GASTP01350 101 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 THY1P04216 161 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 ALPLP05186 524 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 CDH2P19022 906 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 IGFBP5P24593 272 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 CD96P40200 585 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 DAPP51397 102 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 PPP2R2BQ00005 443 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 SEC23BQ15437 767 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 RFX4Q33E94 735 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 ZIK1Q3SY52 487 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 PRAMEF20Q5VT98 475 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 TTC33Q6PID6 262 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 CDK20Q8IZL9 346 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 RNF113BQ8IZP6 322 aaKnown RBP11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 AQP11Q8NBQ7 271 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 OR4K17Q8NGC6 315 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 OR9Q2Q8NGE9 314 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 GPR119Q8TDV5 335 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEM234Q8WY98 164 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 PSD2Q9BQI7 771 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 PRSS27Q9BQR3 290 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 FUZQ9BT04 418 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 DSN1Q9H410 356 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 KRT84Q9NSB2 600 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 MAN2C1Q9NTJ4 1040 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 SACM1LQ9NTJ5 587 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 SMPD3Q9NY59 655 aaPredicted RBP11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 GPR83Q9NYM4 423 aa11.89□□□□□ -0.51
SHKBP1-209ENST00000595803 IGLV3-32A0A0A0MS00 114 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 ELOA3DA6NLF2 546 aaPredicted RBP11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 GNB5O14775 395 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 CDC40O60508 579 aaKnown RBP eCLIP11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 LYPD3O95274 346 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 WDPCPO95876 746 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 F10P00742 488 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 CCL3P10147 92 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 PNMTP11086 282 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 POU2F1P14859 743 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 CNR1P21554 472 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 SLC1A3P43003 542 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 MASP1P48740 699 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 UGT2B15P54855 530 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 RAPSNQ13702 412 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 TUBA3CQ13748 450 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 QPRTQ15274 297 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 TAF11Q15544 211 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 ELOA3BQ3SY89 546 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 SWT1Q5T5J6 900 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 FAHD1Q6P587 224 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 TUBA3EQ6PEY2 450 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 MBOAT2Q6ZWT7 520 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 DHRSXQ8N5I4 330 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 ZNF555Q8NEP9 628 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 ELOA3Q8NG57 546 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 OR4K5Q8NGD3 323 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 PIGXQ8TBF5 258 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEM255BQ8WV15 326 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 TMEM239Q8WW34 195 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 RDH12Q96NR8 316 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 Q9H521 79 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 PTGES2Q9H7Z7 377 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 SH2D2AQ9NP31 389 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 TAS2R10Q9NYW0 307 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 PLA2G3Q9NZ20 509 aa11.88□□□□□ -0.51
SHKBP1-209ENST00000595803 MED31Q9Y3C7 131 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms