RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 ZNF780BQ9Y6R6 833 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 ENPP4Q9Y6X5 453 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 HSPE1-MOB4S4R3N1 261 aa11.65□□□□□ -0.54
SCAF1-202ENST00000595242 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.545e-8■■□□□ 13.1
SCAF1-202ENST00000595242 USF3Q68DE3 2245 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 A0A087WXM4 84 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 TRGV5A0A0B4J1U4 118 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MYOCOSA0A1B0GUC4 107 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 PRAMEF27A3QJZ7 478 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MBD3L4A6NDZ8 208 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 TMEM247A6NEH6 219 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MBD3L5A6NJ08 208 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 GLOD5A6NK44 160 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 HAX1O00165 279 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 GALR3O60755 368 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 UGT2B11O75310 529 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ETS2P15036 469 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 CDH2P19022 906 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ENDOUP21128 410 aaKnown RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MAOAP21397 527 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MATN1P21941 496 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 CPN2P22792 545 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 RRM2P31350 389 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 KCNJ5P48544 419 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 DAPP51397 102 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 RPS26P62854 115 aaKnown RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 PRR5P85299 388 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 GNA13Q14344 377 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ZIK1Q3SY52 487 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 EXOSC6Q5RKV6 272 aaKnown RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 RBM48Q5RL73 367 aaKnown RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF691Q5VV52 312 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ANKRD34AQ69YU3 496 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MED12LQ86YW9 2145 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 GPALPP1Q8IXQ4 340 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 OFCC1Q8IZS5 231 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 LRRC25Q8N386 305 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF786Q8N393 782 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 B3GNT7Q8NFL0 401 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 GPR32P1Q8NGA4 272 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 SPPL2AQ8TCT8 520 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ASB15Q8WXK1 588 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 SMPDL3BQ92485 455 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 HDAC2Q92769 488 aaKnown RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ELP4Q96EB1 424 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 DHRS1Q96LJ7 313 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 MUS81Q96NY9 551 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF607Q96SK3 696 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 PITX2Q99697 317 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 FAM173AQ9BQD7 235 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 GABARAPL3Q9BY60 117 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 RBM38Q9H0Z9 239 aaKnown RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 C3orf14Q9HBI5 128 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 EXD2Q9NVH0 621 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 PDP1Q9P0J1 537 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-202ENST00000595242 U3KQV3 271 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 ROS1P08922 2347 aa11.64□□□□□ -0.55
SCAF1-202ENST00000595242 DSPPQ9NZW4 1301 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 LOC100130705A0A1B0GUX0 176 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 TCRBV16S1A1N1A0A5B0 115 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 WASHC1A8K0Z3 465 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 CHST10O43529 356 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 HCN1O60741 890 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 OR2J2O76002 312 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 OR6B1O95007 311 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 DIRAS1O95057 198 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 CLIC3O95833 236 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 OR12D1P0DN82 309 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 RHCEP18577 417 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 CNR1P21554 472 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 PRKACGP22612 351 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 PPP2R1BP30154 601 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 TLX1P31314 330 aaPredicted RBP11.63□□□□□ -0.55
SCAF1-202ENST00000595242 CEACAM8P31997 349 aaPredicted RBP11.63□□□□□ -0.55
SCAF1-202ENST00000595242 PIGAP37287 484 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 CRISP3P54108 245 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 GABARAPL2P60520 117 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 OLR1P78380 273 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 KRTAP1-1Q07627 177 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 FUT5Q11128 374 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 PPP1R8Q12972 351 aaKnown RBP11.63□□□□□ -0.55
SCAF1-202ENST00000595242 HYAL4Q2M3T9 481 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF750Q32MQ0 723 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 DEFB134Q4QY38 66 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 RPS26P11Q5JNZ5 115 aaPredicted RBP11.63□□□□□ -0.55
SCAF1-202ENST00000595242 NIPAL1Q6NVV3 410 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 QSOX2Q6ZRP7 698 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 CCDC116Q8IYX3 515 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 OR4K14Q8NGD5 310 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 RAB8BQ92930 207 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF566Q969W8 418 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 GIMAP5Q96F15 307 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 DACH2Q96NX9 599 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 GRIP2Q9C0E4 1043 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 LIN28AQ9H9Z2 209 aaKnown RBP11.63□□□□□ -0.55
SCAF1-202ENST00000595242 ZNF223Q9UK11 482 aaPredicted RBP11.63□□□□□ -0.55
SCAF1-202ENST00000595242 SPACA6W5XKT8 324 aa11.63□□□□□ -0.55
SCAF1-202ENST00000595242 A0A087WV62 115 aa11.62□□□□□ -0.55
SCAF1-202ENST00000595242 A0A0G2JPF8 293 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms