RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 A0A1W2PNR3 127 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 PRORSD1PA6NEY8 169 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 SULT2B1O00204 365 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 MSTNO14793 375 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 MRASO14807 208 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 CASKO14936 926 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 EFNA2O43921 213 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 CCDC22O60826 627 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 BCAS1O75363 584 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 SERPINB7O75635 380 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 PGM3O95394 542 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 THBS1P07996 1170 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 GKN3PP0CG01 181 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ARAFP10398 606 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 GPX2P18283 190 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 RPS4Y1P22090 263 aaKnown RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ENPP1P22413 925 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 CXCR1P25024 350 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 SHC1P29353 583 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 POLR2HP52434 150 aaKnown RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 CSNK2A1P68400 391 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 TLE4Q04727 773 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 SNTB1Q13884 538 aaKnown RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 RUNDC3AQ59EK9 446 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 TMEM201Q5SNT2 666 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 FBXW10Q5XX13 1052 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 DLEU7Q6UYE1 221 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF836Q6ZNA1 936 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 FAM214BQ7L5A3 538 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 BTLAQ7Z6A9 289 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 MSRB3Q8IXL7 192 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 SLC43A2Q8N370 569 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 DPP10Q8N608 796 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 PCYOX1LQ8NBM8 494 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 C11orf65Q8NCR3 313 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 HIPK4Q8NE63 616 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 FAM71CQ8NEG0 241 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 DDIT4LQ96D03 193 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 GMPPAQ96IJ6 420 aaPredicted RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ADGRG7Q96K78 797 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ELAC2Q9BQ52 826 aaKnown RBP9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ECSITQ9BQ95 431 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 ZNF385DQ9H6B1 395 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 BCL2L10Q9HD36 194 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 SAR1AQ9NR31 198 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 KLHL28Q9NXS3 571 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 KCNN3Q9UGI6 736 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 CHRNA9Q9UGM1 479 aa9.03□□□□□ -0.96
BRCA1-227ENST00000591849 NCOA6Q14686 2063 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 TMED7-TICAM2A0A0A6YYA0 188 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CDHR4A6H8M9 788 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 TUBAL3A6NHL2 446 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 BBIP1A8MTZ0 92 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 AP3D1O14617 1153 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 DNAJA2O60884 412 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 PRKD3O94806 890 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 NTN1O95631 604 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 BMP2P12643 396 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 ETS2P15036 469 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CD1EP15812 388 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 TACR3P29371 465 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 AQP1P29972 269 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 ADSLP30566 484 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SLC1A3P43003 542 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 KIR2DL2P43627 348 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 DLX5P56178 289 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 OR2B6P58173 313 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 MTPNP58546 118 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 RAC3P60763 192 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 EPS8Q12929 822 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CAPRIN1Q14444 709 aaKnown RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 RNPS1Q15287 305 aaKnown RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 MAPK11Q15759 364 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 EXOC3L2Q2M3D2 409 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CTU2Q2VPK5 515 aaKnown RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SYT14P1Q58G82 188 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 RNF220Q5VTB9 566 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 WBP2NLQ6ICG8 309 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CGB2Q6NT52 195 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 VWA1Q6PCB0 445 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 TMPPEQ6ZT21 453 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 FCRLAQ7L513 359 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SPATA21Q7Z572 469 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 STK32CQ86UX6 486 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 RETREG3Q86VR2 466 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 TMEM200AQ86VY9 491 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SNX32Q86XE0 403 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 ZZZ3Q8IYH5 903 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CLIP4Q8N3C7 705 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 RNF217Q8TC41 542 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SLC26A7Q8TE54 656 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 STARD4Q96DR4 205 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 DNAJA3Q96EY1 480 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 ANKRD27Q96NW4 1050 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 ZNF317Q96PQ6 595 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CPPED1Q9BRF8 314 aaPredicted RBP9.02□□□□□ -0.97
BRCA1-227ENST00000591849 CCDC106Q9BWC9 280 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 SRXN1Q9BYN0 137 aa9.02□□□□□ -0.97
BRCA1-227ENST00000591849 OPN3Q9H1Y3 402 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms