RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ZNF704Q6ZNC4 412 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 MISPQ8IVT2 679 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 OR2L13Q8N349 312 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 CIARTQ8N365 385 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF611Q8N823 705 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 STEAP2Q8NFT2 490 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 OR4N2Q8NGD1 307 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 RFWD2Q8NHY2 731 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 CDC26Q8NHZ8 85 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ZBTB8AQ96BR9 441 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ROPN1LQ96C74 230 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 MTERF3Q96E29 417 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 EBPLQ9BY08 206 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 C7orf69Q9H7B7 122 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 ANKRA2Q9H9E1 313 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 SDR39U1Q9NRG7 319 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 GPR52Q9Y2T5 361 aa8.45□□□□□ -1.06
BRCA1-226ENST00000591534 NSD1Q96L73 2696 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-226ENST00000591534 IGLV3-32A0A0A0MS00 114 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 INAFM1C9JVW0 142 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 E9PBE3 544 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 UPK1AO00322 258 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 HS3ST1O14792 307 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 LSM1O15116 133 aaKnown RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 CFLARO15519 480 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 SS18L1O75177 396 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 SLC22A3O75751 556 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 UTS2O95399 124 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ANGPTL1O95841 491 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 IFNA2P01563 188 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 LINC00032P0C843 101 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 LCN1P31025 176 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ARRB2P32121 409 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 CCKARP32238 428 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 HPCAL1P37235 193 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 CLDN20P56880 219 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 RPS4XP62701 263 aaKnown RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 MXRA7P84157 204 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 BNIP1Q12981 228 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 GUSBP1Q15486 140 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 C6orf136Q5SQH8 315 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ANXA8L1Q5VT79 327 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ESPNLQ6ZVH7 1005 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 MARCH3Q86UD3 253 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ZFP28Q8NHY6 868 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 GPR151Q8TDV0 419 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 MCUR1Q96AQ8 359 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ELP4Q96EB1 424 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 C11orf24Q96F05 449 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF764Q96H86 408 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 MARK4Q96L34 752 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 LMF2Q9BU23 707 aaKnown RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 MYLK2Q9H1R3 596 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 ZNF701Q9NV72 531 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-226ENST00000591534 CORO2BQ9UQ03 480 aa8.44□□□□□ -1.06
BRCA1-226ENST00000591534 FAM234BA2RU67 622 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 C7orf72A4D263 438 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GJE1A6NN92 205 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 TMEM233B4DJY2 109 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 H0YC42 278 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GYG2O15488 501 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 PEX11AO75192 247 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 AQP8O94778 261 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 SOX30O94993 753 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 NGFRP08138 427 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 PSMB1P20618 241 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 PPIBP23284 216 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GABRA3P34903 492 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 IDUAP35475 653 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 EIF1P41567 113 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 TPD52P55327 224 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 C21orf58P58505 322 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 TXNL4AP83876 142 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 DMTNQ08495 405 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 RNPS1Q15287 305 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GALNTL6Q49A17 601 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 SLC9B1Q4ZJI4 515 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 CPTPQ5TA50 214 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 FOXB2Q5VYV0 432 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 CGB2Q6NT52 195 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 STAC2Q6ZMT1 411 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 CXXC5Q7LFL8 322 aaKnown RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 SSX8Q7RTT4 187 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 PRIMA1Q86XR5 153 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 GTPBP8Q8N3Z3 284 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 FITM2Q8N6M3 262 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 TRIML2Q8N7C3 387 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 CDRT4Q8N9R6 151 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 OR5M1Q8NGP8 315 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 OR10D3Q8NH80 312 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 RNF141Q8WVD5 230 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 TESCQ96BS2 214 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 Q96M66 194 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 DOCK7Q96N67 2140 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 AMDHD1Q96NU7 426 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 HOPXQ9BPY8 73 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-226ENST00000591534 DPY30Q9C005 99 aa8.43□□□□□ -1.06
BRCA1-226ENST00000591534 ACTR6Q9GZN1 396 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms