RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ROPN1LQ96C74 230 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 PPP1R36Q96LQ0 422 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 OR5B2Q96R09 309 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 POTEKPQ9BYX7 375 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 QRSL1Q9H0R6 528 aaKnown RBP10.84□□□□□ -0.67
VAT1-206ENST00000589709 ESRP2Q9H6T0 727 aaKnown RBP10.84□□□□□ -0.67
VAT1-206ENST00000589709 MEAF6Q9HAF1 191 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 BTNL2Q9UIR0 455 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 WDR45Q9Y484 360 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 RNF115Q9Y4L5 304 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 USF3Q68DE3 2245 aa10.84□□□□□ -0.67
VAT1-206ENST00000589709 FN1P02751 2386 aaKnown RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 CSPG4Q6UVK1 2322 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 IGKV3D-15A0A087WSY6 115 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 IGHV3-15A0A0B4J1V0 119 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 CYP7B1O75881 506 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 CPSF4O95639 269 aaKnown RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 CD3EP07766 207 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 UBTFL6P0CB48 400 aaPredicted RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 S100A3P33764 101 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 CLK1P49759 484 aaKnown RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 DIO1P49895 249 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 TXNL4AP83876 142 aaKnown RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 MERTKQ12866 999 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 TSC22D1Q15714 1073 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 SYT14P1Q58G82 188 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 SPANXN4Q5MJ08 99 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 SEZ6L2Q6UXD5 910 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 BHLHA15Q7RTS1 189 aaPredicted RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 OLIG3Q7RTU3 272 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 GALNT5Q7Z7M9 940 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 MTDHQ86UE4 582 aaKnown RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 ANKRD46Q86W74 232 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 ZNF619Q8N2I2 560 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 LILRB1Q8NHL6 650 aaPredicted RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 RAB3IL1Q8TBN0 382 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 ZNF75CPQ92670 426 aaPredicted RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 RAB8BQ92930 207 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 ZG16BQ96DA0 208 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 CCDC115Q96NT0 180 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 CCDC106Q9BWC9 280 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 NUF2Q9BZD4 464 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 EXOSC3Q9NQT5 275 aaKnown RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 LIPT1Q9Y234 373 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 SPIN1Q9Y657 262 aaPredicted RBP10.83□□□□□ -0.68
VAT1-206ENST00000589709 TLN2Q9Y4G6 2542 aa10.83□□□□□ -0.68
VAT1-206ENST00000589709 ZANQ9Y493 2812 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 TRIM64A6NGJ6 449 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 TRIM64BA6NI03 449 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 E9PBE3 544 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 OVOL3O00110 214 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 SULT2B1O00204 365 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 DNPH1O43598 174 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 DANCRP0C864 163 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 COX5AP20674 150 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 BGNP21810 368 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 KHKP50053 298 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 CASP9P55211 416 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 ATP5J2P56134 94 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 RPS4XP62701 263 aaKnown RBP10.82□□□□□ -0.68
VAT1-206ENST00000589709 KCNJ10P78508 379 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 LRRC74AQ0VAA2 488 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 BST1Q10588 318 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 FUT5Q11128 374 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 FAM174BQ3ZCQ3 159 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 TNFAIP8L2Q6P589 184 aaPredicted RBP10.82□□□□□ -0.68
VAT1-206ENST00000589709 FRRS1Q6ZNA5 592 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 GRINAQ7Z429 371 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 P2RY8Q86VZ1 359 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 ARFGAP2Q8N6H7 521 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 PMM1Q92871 262 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 ATP6V1G3Q96LB4 118 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 TRNT1Q96Q11 434 aaKnown RBP10.82□□□□□ -0.68
VAT1-206ENST00000589709 SLC35A5Q9BS91 424 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 TMBIM4Q9HC24 238 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.82□□□□□ -0.68
VAT1-206ENST00000589709 PNPOQ9NVS9 261 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 EMC3Q9P0I2 261 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 MARCOQ9UEW3 520 aaPredicted RBP10.82□□□□□ -0.68
VAT1-206ENST00000589709 PRDM4Q9UKN5 801 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 LAMP3Q9UQV4 416 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 HDGFL3Q9Y3E1 203 aa10.82□□□□□ -0.68
VAT1-206ENST00000589709 PRAMEF27A3QJZ7 478 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 DPRXA6NFQ7 191 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 HMGN4O00479 90 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 BCAS1O75363 584 aaPredicted RBP10.81□□□□□ -0.68
VAT1-206ENST00000589709 PGM3O95394 542 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 PMS2P2O95744 297 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 FESP07332 822 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 CHI3L1P36222 383 aaPredicted RBP10.81□□□□□ -0.68
VAT1-206ENST00000589709 MAGEA8P43361 318 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 HTR3AP46098 478 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 ANXA11P50995 505 aaKnown RBP10.81□□□□□ -0.68
VAT1-206ENST00000589709 MAP2K6P52564 334 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 CHRNEQ04844 493 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 CAPRIN1Q14444 709 aaKnown RBP10.81□□□□□ -0.68
VAT1-206ENST00000589709 ETFDHQ16134 617 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 TIMM23BQ5SRD1 257 aa10.81□□□□□ -0.68
VAT1-206ENST00000589709 ABLIM2Q6H8Q1 611 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms