RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CLDND1Q9NY35 253 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 MAT2BQ9NZL9 334 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 IL20RAQ9UHF4 553 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 CA5BQ9Y2D0 317 aa6.84□□□□□ -1.31
ZNF540-206ENST00000589117 OR5K3A6NET4 321 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 BHLHE40O14503 412 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 RNF13O43567 381 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 PIP5K1CO60331 668 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 CLEC2LP0C7M8 214 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 RNH1P13489 461 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 GLULP15104 373 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 POU3F2P20265 443 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 EVX1P49640 407 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 HHEXQ03014 270 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 LGALS3BPQ08380 585 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 DOC2BQ14184 412 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MAPK14Q16539 360 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF791Q3KP31 576 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZFP69Q49AA0 526 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 EXOSC6Q5RKV6 272 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ARHGAP11AQ6P4F7 1023 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ULK3Q6PHR2 472 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 DGLUCYQ7Z3D6 616 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ABI3BPQ7Z7G0 1075 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 GATAD2AQ86YP4 633 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 CMIPQ8IY22 773 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF595Q8IYB9 648 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 CA13Q8N1Q1 262 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MS4A15Q8N5U1 240 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ARIH2OSQ8N7S6 290 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF614Q8N883 585 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZFP41Q8N8Y5 198 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 BVESQ8NE79 360 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 OR10H4Q8NGA5 316 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 OR5W2Q8NH69 310 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 RIT1Q92963 219 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 CTRCQ99895 268 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 NEK6Q9HC98 313 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 Q9N2J8 555 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 HAO2Q9NYQ3 351 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZNF223Q9UK11 482 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MMP17Q9ULZ9 603 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MDC1Q14676 2089 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 LAMA3Q16787 3333 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 LINC00854A0A1B0GVQ3 168 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MEIOCA2RUB1 952 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 HMX3A6NHT5 357 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 FAM183AA6NL82 134 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 FAM25AB3EWG3 89 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 FAM25CB3EWG5 89 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 FAM25GB3EWG6 89 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 J3QRE1 110 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 PEX12O00623 359 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 SOCS6O14544 535 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 PPM1BO75688 479 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 CSF3P09919 207 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 PRG2P13727 222 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ADH6P28332 368 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MAP3K8P41279 467 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 RFX3P48380 749 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 GPR143P51810 404 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 UBE2IP63279 158 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MRPS15P82914 257 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 EXOSC7Q15024 291 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ZMAT1Q5H9K5 638 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ALG10BQ5I7T1 473 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 LSMEM1Q8N8F7 131 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 SLC37A3Q8NCC5 494 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 BBS1Q8NFJ9 593 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 OR52R1Q8NGF1 315 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 SLC37A2Q8TED4 501 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 HMGB4Q8WW32 186 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 RELTQ969Z4 430 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MSANTD3Q96H12 275 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 AHCYL2Q96HN2 611 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 SNX18Q96RF0 628 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 HOXD1Q9GZZ0 328 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 OR51V1Q9H2C8 321 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MIXL1Q9H2W2 232 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 MKKSQ9NPJ1 570 aaPredicted RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 ENAMQ9NRM1 1142 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 CLEC1BQ9P126 229 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 SIGLEC7Q9Y286 467 aa6.83□□□□□ -1.32
ZNF540-206ENST00000589117 YARS2Q9Y2Z4 477 aaKnown RBP6.83□□□□□ -1.32
ZNF540-206ENST00000589117 SPTY2D1-AS1A0A0U1RR47 76 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 FAM240BA0A1B0GVZ2 78 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TCRBV16S1A1N1A0A5B0 115 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SGK494L7N484 410 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 GTPBP1O00178 669 aaKnown RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TFECO14948 347 aaPredicted RBP6.82□□□□□ -1.32
ZNF540-206ENST00000589117 TMPRSS2O15393 492 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 PLPP2O43688 288 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 IDH3BO43837 385 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 PRAMEF2O60811 474 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 CTNSO60931 367 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 SLC2A10O95528 541 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 PVRP15151 417 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 MAKP20794 623 aa6.82□□□□□ -1.32
ZNF540-206ENST00000589117 HTR2AP28223 471 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms