RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 NPAP1Q9NZP6 1156 aa12.34□□□□□ -0.43
VMP1-209ENST00000588915 LPAR3Q9UBY5 353 aa12.34□□□□□ -0.43
VMP1-209ENST00000588915 SPIN1Q9Y657 262 aaPredicted RBP12.34□□□□□ -0.43
VMP1-209ENST00000588915 NUP214P35658 2090 aaPredicted RBP12.34□□□□□ -0.43
VMP1-209ENST00000588915 PLCE1Q9P212 2302 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 IGHV4-30-2A0A087WSY4 118 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 C9JVG2 144 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 E7EQL1 145 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 SULT2B1O00204 365 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 PIP5K1BO14986 540 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 ANKRD28O15084 1053 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 STX11O75558 287 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 C6orf47O95873 294 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
VMP1-209ENST00000588915 BMP4P12644 408 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 CCR4P51679 360 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 IRX1P78414 480 aaPredicted RBP12.33□□□□□ -0.44
VMP1-209ENST00000588915 NDUFAF6Q330K2 333 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 ATP6AP1LQ52LC2 224 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 XKR7Q5GH72 579 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 C6orf136Q5SQH8 315 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 RIMKLAQ8IXN7 391 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 PIAS4Q8N2W9 510 aaPredicted RBP12.33□□□□□ -0.44
VMP1-209ENST00000588915 MUC15Q8N387 334 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 TMCO5AQ8N6Q1 288 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 OR2W6PQ8NHA6 318 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 PROX1Q92786 737 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 ZNF775Q96BV0 537 aaPredicted RBP12.33□□□□□ -0.44
VMP1-209ENST00000588915 ZHX1-C8orf76Q96EF9 292 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 MUS81Q96NY9 551 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 CACNG6Q9BXT2 260 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 C12orf65Q9H3J6 166 aaKnown RBP12.33□□□□□ -0.44
VMP1-209ENST00000588915 ACER3Q9NUN7 267 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 ASB6Q9NWX5 421 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 NOSIPQ9Y314 301 aaKnown RBP12.33□□□□□ -0.44
VMP1-209ENST00000588915 SLC25A15Q9Y619 301 aa12.33□□□□□ -0.44
VMP1-209ENST00000588915 CIB4A0PJX0 185 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 FAM234BA2RU67 622 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 ZNF716A6NP11 495 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 H7C417 338 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 GPRIN2O60269 458 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 PEX11AO75192 247 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 AGR2O95994 175 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 CSTAP01040 98 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 CSF3P09919 207 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 MATN1P21941 496 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 EDNRAP25101 427 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 CD40P25942 277 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 SERPINB5P36952 375 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 SLC16A1P53985 500 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 PTGR1Q14914 329 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 ARHGAP11BQ3KRB8 267 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 SYT14P1Q58G82 188 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 ABLIM2Q6H8Q1 611 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 SLC22A25Q6T423 547 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 EIF3MQ7L2H7 374 aaKnown RBP12.32□□□□□ -0.44
VMP1-209ENST00000588915 PIGXQ8TBF5 258 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 APH1AQ96BI3 265 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 DUSP26Q9BV47 211 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 QRSL1Q9H0R6 528 aaKnown RBP12.32□□□□□ -0.44
VMP1-209ENST00000588915 EXD2Q9NVH0 621 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 MKS1Q9NXB0 559 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 TAS2R16Q9NYV7 291 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 MALT1Q9UDY8 824 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 POU2F3Q9UKI9 436 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 HDGFL3Q9Y3E1 203 aa12.32□□□□□ -0.44
VMP1-209ENST00000588915 CFLARO15519 480 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 MRPL33O75394 65 aaKnown RBP12.31□□□□□ -0.44
VMP1-209ENST00000588915 UGT2B17O75795 530 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 PMS2P2O95744 297 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 SHBGP04278 402 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 CHRNGP07510 517 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 RNF144AP50876 292 aaPredicted RBP12.31□□□□□ -0.44
VMP1-209ENST00000588915 FABP6P51161 128 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 HBA1P69905 142 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 MERTKQ12866 999 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 MAD2L1Q13257 205 aaPredicted RBP12.31□□□□□ -0.44
VMP1-209ENST00000588915 GPR68Q15743 365 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 SMU1Q2TAY7 513 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 IL23RQ5VWK5 629 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 CYB5R2Q6BCY4 276 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 C6orf120Q7Z4R8 191 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 UBE2J2Q8N2K1 259 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 FNDC5Q8NAU1 212 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 FAM71CQ8NEG0 241 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 MIPOL1Q8TD10 442 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 FAM168AQ92567 244 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 INPP5KQ9BT40 448 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 CCDC106Q9BWC9 280 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 BEX2Q9BXY8 128 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 ZNF350Q9GZX5 532 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 POLE3Q9NRF9 147 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 PARPBPQ9NWS1 579 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 KCNE5Q9UJ90 142 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 TRAPPC4Q9Y296 219 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 SLC35A3Q9Y2D2 325 aa12.31□□□□□ -0.44
VMP1-209ENST00000588915 CCT8L1PA6NM43 557 aa12.3□□□□□ -0.44
VMP1-209ENST00000588915 TMEM233B4DJY2 109 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms