RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 IRGMA1A4Y4 181 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 VSTM2BA6NLU5 285 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 SNTNA6NMZ2 147 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 KDM4EB2RXH2 506 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 SURF4O15260 269 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF264O43296 627 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 TSPAN2O60636 221 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 HCN1O60741 890 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 CPNE3O75131 537 aaKnown RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 GABARAPO95166 117 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 RCBTB2O95199 551 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 RAB36O95755 333 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ONECUT2O95948 504 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 HMGN1P05114 100 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 NGFRP08138 427 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ADRA2AP08913 450 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF883P0CG24 379 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 CD36P16671 472 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 TBXA2RP21731 343 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ACVR2AP27037 513 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 GRK5P34947 590 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 TGFBR2P37173 567 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ADH7P40394 386 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 GPR143P51810 404 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 RNF4P78317 190 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 CRYZQ08257 329 aaKnown RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 NFATC3Q12968 1075 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 SKP2Q13309 424 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 AQP6Q13520 282 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 IL11RAQ14626 422 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF385CQ66K41 422 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 DESI1Q6ICB0 168 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 WBP2NLQ6ICG8 309 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 LCN10Q6JVE6 187 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 RPL13AP3Q6NVV1 102 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 TMPRSS11FQ6ZWK6 438 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 P2RY8Q86VZ1 359 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF441Q8N8Z8 693 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 AGBL5Q8NDL9 886 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 OR2T33Q8NG76 320 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ZFAND2BQ8WV99 257 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 DNAJA4Q8WW22 397 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 SGTBQ96EQ0 304 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 HSPBAP1Q96EW2 488 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 LOXL4Q96JB6 756 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 BCL7BQ9BQE9 202 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 CRB3Q9BUF7 120 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 IFT27Q9BW83 186 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 OR52D1Q9H346 318 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 UBQLN3Q9H347 655 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 GPN2Q9H9Y4 310 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 MEPEQ9NQ76 525 aaPredicted RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 EXOSC3Q9NQT5 275 aaKnown RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 RXFP3Q9NSD7 469 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 IL20Q9NYY1 176 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 CARD8Q9Y2G2 431 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 PCDHGB2Q9Y5G2 931 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 LAMA1P25391 3075 aa8.03□□□□□ -1.12
SMAD4-206ENST00000588860 ASH1LQ9NR48 2969 aaKnown RBP8.03□□□□□ -1.12
SMAD4-206ENST00000588860 TRBV11-1A0A0K0K1C0 115 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 TRIM64BA6NI03 449 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ELOA3DA6NLF2 546 aaPredicted RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 M0R082 166 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 MEN1O00255 615 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 FLRT2O43155 660 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 PRODHO43272 600 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 GMFGO60234 142 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 RFPL3O75679 317 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 SLC2A10O95528 541 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 BCL10O95999 233 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 GP1BAP07359 652 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 HSMCR30P0CW71 290 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 CCL4P13236 92 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ZNF28P17035 718 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 BMP7P18075 431 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ACP1P24666 158 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ABCD3P28288 659 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 LIPAP38571 399 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 SLC6A8P48029 635 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 LSM3P62310 102 aaKnown RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 EFNB1P98172 346 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 MC2RQ01718 297 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ROR2Q01974 943 aaKnown RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ZFP36L1Q07352 338 aaKnown RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 DYNC1I2Q13409 638 aaKnown RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 SPCS2Q15005 226 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 NCF4Q15080 339 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 MED22Q15528 200 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 CTF1Q16619 201 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 TMEM44Q2T9K0 475 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ELOA3BQ3SY89 546 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 KLHL22Q53GT1 634 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 CCDC157Q569K6 752 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 ARMCX4Q5H9R4 360 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 PAPD4Q6PIY7 484 aaKnown RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 SMARCD3Q6STE5 483 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 APOOLQ6UXV4 268 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 CPEB2Q7Z5Q1 589 aaKnown RBP8.02□□□□□ -1.13
SMAD4-206ENST00000588860 AMER2Q8N7J2 671 aa8.02□□□□□ -1.13
SMAD4-206ENST00000588860 BMPERQ8N8U9 685 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms