RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SF3A3Q12874 501 aaKnown RBP eCLIP14.56□□□□□ -0.084e-7■■■■□ 23.9
ERBB2-222ENST00000584908 NFYCQ13952 458 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 MEX3BQ6ZN04 569 aaKnown RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 NET1Q7Z628 596 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 PTOV1Q86YD1 416 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 CLIP4Q8N3C7 705 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 NFKBIDQ8NI38 313 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF563Q8TA94 476 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 RNASE6Q93091 150 aaKnown RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 CPNE4Q96A23 557 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 STARD4Q96DR4 205 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 LRRC46Q96FV0 321 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 RSPO3Q9BXY4 272 aaPredicted RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 ARMC7Q9H6L4 198 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 KAT8Q9H7Z6 458 aaKnown RBP14.56□□□□□ -0.08
ERBB2-222ENST00000584908 SLC24A3Q9HC58 644 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 TIGARQ9NQ88 270 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 SERINC1Q9NRX5 453 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 RLIMQ9NVW2 624 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 PACSIN3Q9UKS6 424 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 CAPN7Q9Y6W3 813 aa14.56□□□□□ -0.08
ERBB2-222ENST00000584908 FXYD1O00168 92 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 AP3D1O14617 1153 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 SYNGR4O95473 234 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 UQCRBP14927 111 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 PRKAR1BP31321 381 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 IDH2P48735 452 aaKnown RBP14.55□□□□□ -0.08
ERBB2-222ENST00000584908 CLK1P49759 484 aaKnown RBP14.55□□□□□ -0.08
ERBB2-222ENST00000584908 MAP2K6P52564 334 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 AGFG1P52594 562 aaKnown RBP14.55□□□□□ -0.08
ERBB2-222ENST00000584908 RAC3P60763 192 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 SCARB2Q14108 478 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 SELPLGQ14242 412 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF239Q16600 458 aaKnown RBP14.55□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF311Q5JNZ3 666 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 FAM214BQ7L5A3 538 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 ADGRG3Q86Y34 549 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF295-AS1Q8N0V1 137 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 C14orf79Q96F83 325 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 GMPPAQ96IJ6 420 aaPredicted RBP14.55□□□□□ -0.08
ERBB2-222ENST00000584908 ADAM19Q9H013 955 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 CTPS2Q9NRF8 586 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 GLRX2Q9NS18 164 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 CHRNA9Q9UGM1 479 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 SPIN1Q9Y657 262 aaPredicted RBP14.55□□□□□ -0.08
ERBB2-222ENST00000584908 MPDZO75970 2070 aa14.55□□□□□ -0.08
ERBB2-222ENST00000584908 MSTNO14793 375 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SS18L1O75177 396 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-222ENST00000584908 CGAP01215 116 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 PRF1P14222 555 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SLC6A2P23975 617 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 LSP1P33241 339 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 GZMMP51124 257 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SEC24CP53992 1094 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 PCBP3P57721 371 aaKnown RBP14.54□□□□□ -0.08
ERBB2-222ENST00000584908 MTPNP58546 118 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 CYLC2Q14093 348 aaPredicted RBP14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SYT14P1Q58G82 188 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 NANOGP8Q6NSW7 305 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 DHRS4L2Q6PKH6 230 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF550Q7Z398 422 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SPATA21Q7Z572 469 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SERPINA11Q86U17 422 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 KRT73Q86Y46 540 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 MCEMP1Q8IX19 187 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 C11orf65Q8NCR3 313 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 HIPK4Q8NE63 616 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 OR8J3Q8NGG0 315 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 RNF128Q8TEB7 428 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 LRRC58Q96CX6 371 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SPATA5L1Q9BVQ7 753 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 SRXN1Q9BYN0 137 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 NANOGQ9H9S0 305 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 CACYBPQ9HB71 228 aaKnown RBP14.54□□□□□ -0.08
ERBB2-222ENST00000584908 GP6Q9HCN6 339 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 KCNN3Q9UGI6 736 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 PDZD2O15018 2839 aa14.54□□□□□ -0.08
ERBB2-222ENST00000584908 HRNRQ86YZ3 2850 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-222ENST00000584908 A8MXE2 369 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 EEF1E1-BLOC1S5C9J1V9 151 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 MRASO14807 208 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 EEF1E1O43324 174 aaKnown RBP14.53□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF208O43345 1280 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 CCDC22O60826 627 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 CD8BP10966 210 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 DRD4P21917 467 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 SLC7A1P30825 629 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 POLR2HP52434 150 aaKnown RBP14.53□□□□□ -0.08
ERBB2-222ENST00000584908 SORDQ00796 357 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 REP15Q6BDI9 236 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 VWA1Q6PCB0 445 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 TMPPEQ6ZT21 453 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 GDF7Q7Z4P5 450 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 BTLAQ7Z6A9 289 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 SNX32Q86XE0 403 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 BHLHE22Q8NFJ8 381 aaPredicted RBP14.53□□□□□ -0.08
ERBB2-222ENST00000584908 RP9Q8TA86 221 aaKnown RBP14.53□□□□□ -0.08
ERBB2-222ENST00000584908 ZNF607Q96SK3 696 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 SH3GL1Q99961 368 aa14.53□□□□□ -0.08
ERBB2-222ENST00000584908 PRRG4Q9BZD6 226 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms