RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CENPMQ9NSP4 180 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 MGAT4BQ9UQ53 548 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 TEX13CA0A0J9YWL9 993 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 TRAPPC13A5PLN9 417 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 UNC119BA6NIH7 251 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 MCIDASD6RGH6 385 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 K7ESF4 209 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 M0R082 166 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SLC16A6O15403 523 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CTNSO60931 367 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 TRAPPC6AO75865 159 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 LALBAP00709 142 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 HPRP00739 348 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CXCR1P25024 350 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 GSTM2P28161 218 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SDC2P34741 201 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 IDUAP35475 653 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SRYQ05066 204 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SPEM2Q0P670 501 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 NCF4Q15080 339 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 ZMAT1Q5H9K5 638 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 NANOGNBQ7Z5D8 188 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 COMMD2Q86X83 199 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SERPINA12Q8IW75 414 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 FAM83FQ8NEG4 500 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 OR2T33Q8NG76 320 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SPRYD4Q8WW59 207 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 TTYH2Q9BSA4 534 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 PINK1Q9BXM7 581 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 ASPNQ9BXN1 380 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SLC25A18Q9H1K4 315 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SEC61A2Q9H9S3 476 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 NANSQ9NR45 359 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 PSORS1C1Q9UIG5 152 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 LIPT1Q9Y234 373 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 ADGRG4Q8IZF6 3080 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 AKAP13Q12802 2813 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 PRR23D1E9PI22 279 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 OR2J2O76002 312 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 UTS2O95399 124 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CPNE6O95741 557 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SLC35E2P0CK97 266 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 PRR23D2P0DMB1 279 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 CT45A8P0DMV1 189 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CT45A9P0DMV2 189 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 OR12D2P58182 307 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CTXN1P60606 82 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CXCR4P61073 352 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 CT45A2Q5DJT8 189 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 B3GNTL1Q67FW5 361 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 SLC6A19Q695T7 634 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 C1orf94Q6P1W5 598 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 ESPNLQ6ZVH7 1005 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SLC29A4Q7RTT9 530 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 VASH2Q86V25 355 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 OR2L13Q8N349 312 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 TMEM105Q8N8V8 129 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 SNX33Q8WV41 574 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 RASSF5Q8WWW0 418 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 ZNF582Q96NG8 517 aaPredicted RBP9.45□□□□□ -0.9
RFFL-212ENST00000584655 PDCD1LG2Q9BQ51 273 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 TEX12Q9BXU0 123 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 METTL7AQ9H8H3 244 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 POU2F3Q9UKI9 436 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 RALGAPA1Q6GYQ0 2036 aa9.45□□□□□ -0.9
RFFL-212ENST00000584655 IQCMA0A1B0GVH7 501 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 RNF13O43567 381 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 IMPDH2P12268 514 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 NID1P14543 1247 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 GLB1P16278 677 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 IL11P20809 199 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 SMIM11AP58511 58 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 ZNF33BQ06732 778 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 TGIF1Q15583 401 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 LRRC69Q6ZNQ3 347 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 C1orf210Q8IVY1 113 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 CHCHD4Q8N4Q1 142 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 GOLM1Q8NBJ4 401 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 ACOT11Q8WXI4 607 aaPredicted RBP9.44□□□□□ -0.9
RFFL-212ENST00000584655 GCDHQ92947 438 aaPredicted RBP9.44□□□□□ -0.9
RFFL-212ENST00000584655 KTI12Q96EK9 354 aaPredicted RBP9.44□□□□□ -0.9
RFFL-212ENST00000584655 PCOLCE2Q9UKZ9 415 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 E9PI62 339 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 SELENOFO60613 162 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 PAHP00439 452 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 ADAP00813 363 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 HIST1H2ABP04908 130 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 CDK1P06493 297 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 SLC2A2P11168 524 aaPredicted RBP9.44□□□□□ -0.9
RFFL-212ENST00000584655 IFNGR2P38484 337 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 SKP1P63208 163 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 FXNQ16595 210 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 CCDC92Q53HC0 331 aaPredicted RBP9.44□□□□□ -0.9
RFFL-212ENST00000584655 LEG1Q6P5S2 330 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 CORO6Q6QEF8 472 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 ASB18Q6ZVZ8 466 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 HIST3H2AQ7L7L0 130 aa9.44□□□□□ -0.9
RFFL-212ENST00000584655 PPP1R3BQ86XI6 285 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms