RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	TMPPE	Q6ZT21	453 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SSX8	Q7RTT4	187 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ANKFN1	Q8N957	763 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	STEAP2	Q8NFT2	490 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF563	Q8TA94	476 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	WDR60	Q8WVS4	1066 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZG16B	Q96DA0	208 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZHX1-C8orf76	Q96EF9	292 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	WFIKKN1	Q96NZ8	548 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CCDC106	Q9BWC9	280 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SRXN1	Q9BYN0	137 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ARMC7	Q9H6L4	198 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TPT1P8	Q9HAU6	139 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	INTS9	Q9NV88	658 aa	Known RBP	11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CHRNA9	Q9UGM1	479 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HDGFL3	Q9Y3E1	203 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GMEB1	Q9Y692	573 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DSPP	Q9NZW4	1301 aa		11.23	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708		A0A0G2JPF8	293 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF724	A8MTY0	619 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HNRNPCL2	B2RXH8	293 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HNRNPCL3	B7ZW38	293 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708		C9JVG2	144 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF208	O43345	1280 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CYTIP	O60759	359 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HNRNPCL1	O60812	293 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PMS2P2	O95744	297 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GSN	P06396	782 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	THBS1	P07996	1170 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CHRM4	P08173	479 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TFPT	P0C1Z6	253 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	HNRNPCL4	P0DMR1	293 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	BMP2	P12643	396 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	H2AFX	P16104	143 aa	Predicted RBP	11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PPIB	P23284	216 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CCKAR	P32238	428 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MTOR	P42345	2549 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SLC1A3	P43003	542 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	IDH3A	P50213	366 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ATP4B	P51164	291 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PPP2R2A	P63151	447 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TTMP	Q5BVD1	217 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	COX20	Q5RI15	118 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	STAC2	Q6ZMT1	411 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ABHD3	Q8WU67	409 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ROBO4	Q8WZ75	1007 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GTF2H4	Q92759	462 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SLC35B4	Q969S0	331 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF524	Q96C55	264 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	OR5B2	Q96R09	309 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SIKE1	Q9BRV8	207 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RABEP2	Q9H5N1	569 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CACYBP	Q9HB71	228 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KLHL28	Q9NXS3	571 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	EMC3	Q9P0I2	261 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CLEC4A	Q9UMR7	237 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ZNF232	Q9UNY5	417 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TRAPPC4	Q9Y296	219 aa		11.22	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	IGKV3D-15	A0A087WSY6	115 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708		A0A096LPI6	279 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CDHR4	A6H8M9	788 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CFAP73	A6NFT4	308 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DEFB108A	A8MXU0	73 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SULT2B1	O00204	365 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GPR171	O14626	319 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	EIF1B	O60739	113 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	FPR1	P21462	350 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CRAT	P43155	626 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DIO1	P49895	249 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RNF144A	P50876	292 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	POLR2H	P52434	150 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	NR1H2	P55055	460 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	DSTN	P60981	165 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RASGEF1B	Q0VAM2	473 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KEAP1	Q14145	624 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	LARS2	Q15031	903 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	EXOC3L2	Q2M3D2	409 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	LIN52	Q52LA3	116 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	BEX5	Q5H9J7	111 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	C6orf10	Q5SRN2	563 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	LRIF1	Q5T3J3	769 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	RNF220	Q5VTB9	566 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	BLOC1S3	Q6QNY0	202 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TFAP2E	Q6VUC0	442 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	OLIG3	Q7RTU3	272 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MTDH	Q86UE4	582 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	TUSC5	Q8IXB3	177 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	GABRG1	Q8N1C3	465 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	ATP6V1C2	Q8NEY4	427 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CNOT9	Q92600	299 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MARK4	Q96L34	752 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	MAGEB18	Q96M61	343 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PIP5K1A	Q99755	562 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PSD2	Q9BQI7	771 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	KLHL4	Q9C0H6	718 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	PAIP1	Q9H074	479 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	QRSL1	Q9H0R6	528 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	BCL2L10	Q9HD36	194 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	SLCO1B3	Q9NPD5	702 aa		11.21	□□□□□ -0.61
CDK5RAP3-222	ENST00000581708	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.21	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms