RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 AKAP10O43572 662 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SCO2O43819 266 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CXCL13O43927 109 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FADS1O60427 444 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PRPS2P11908 318 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PCSK2P16519 638 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 COX5AP20674 150 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MAPK1P28482 360 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LIMS1P48059 325 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ALDH9A1P49189 494 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ARFIP2P53365 341 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NME5P56597 212 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TRA2BP62995 288 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RAC1P63000 192 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DUSP2Q05923 314 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 C2orf80Q0P641 193 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PTGR1Q14914 329 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TSC22D1Q15714 1073 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF239Q16600 458 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SMU1Q2TAY7 513 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF385BQ569K4 471 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PDSS1Q5T2R2 415 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MFSD12Q6NUT3 480 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FAM180BQ6P0A1 224 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SHISA2Q6UWI4 295 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NPSR1Q6W5P4 371 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SPATA21Q7Z572 469 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SPATA19Q7Z5L4 167 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KRTCAP2Q8N6L1 136 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CEP70Q8NHQ1 597 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF418Q8TF45 676 aaPredicted RBP6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 STON2Q8WXE9 905 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ELAC2Q9BQ52 826 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FAIM2Q9BWQ8 316 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NOP53Q9NZM5 478 aaKnown RBP6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NPAP1Q9NZP6 1156 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MED11Q9P086 117 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KLHL14Q9P2G3 628 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GPR45Q9Y5Y3 372 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PCNX3Q9H6A9 2034 aa6.32□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR5H1A6NKK0 313 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TRIM77I1YAP6 450 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SCAMP2O15127 329 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 UBDO15205 165 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SNX3O60493 162 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PGM3O95394 542 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ADAP00813 363 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TACSTD2P09758 323 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DDCP20711 480 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 EFNA1P20827 205 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PTNP21246 168 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ME2P23368 584 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 IL12AP29459 219 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HPCAL1P37235 193 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FEN1P39748 380 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GSTM5P46439 218 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ASMTP46597 345 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR3A2P47893 321 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CLK3P49761 638 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FABP6P51161 128 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DVL1P1P54792 670 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CLDN8P56748 225 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CORO7P57737 925 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HILS1P60008 231 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 UFM1P61960 85 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 C17orf67Q0P5P2 114 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MAD2L1Q13257 205 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PDE7AQ13946 482 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LTB4RQ15722 352 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 STK11Q15831 433 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZSWIM7Q19AV6 140 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CYP27C1Q4G0S4 372 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TRMT12Q53H54 448 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF628Q5EBL2 1059 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 C1QTNF12Q5T7M4 302 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HBMQ6B0K9 141 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC22A25Q6T423 547 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KLHL17Q6TDP4 642 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 B3GLCTQ6Y288 498 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 IKBIPQ70UQ0 350 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NUFIP2Q7Z417 695 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RIMKLAQ8IXN7 391 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SAMD14Q8IZD0 417 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PIAS4Q8N2W9 510 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LINC01356Q8N9X3 169 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR7A2PQ8NGA2 310 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR5M1Q8NGP8 315 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR9I1Q8NGQ6 314 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ABHD3Q8WU67 409 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HTRA1Q92743 480 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CPNE4Q96A23 557 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 EXOSC8Q96B26 276 aaKnown RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZBTB8AQ96BR9 441 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 EFHD2Q96C19 240 aaPredicted RBP6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KLHL29Q96CT2 875 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TEX37Q96LM6 180 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF681Q96N22 645 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SIKE1Q9BRV8 207 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 INPP5KQ9BT40 448 aa6.31□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF747Q9BV97 191 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms