RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 PTOV1Q86YD1 416 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 MARVELD3Q96A59 401 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 LRRC58Q96CX6 371 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 COQ10BQ9H8M1 238 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 NANOGQ9H9S0 305 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 SERINC1Q9NRX5 453 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 ARMCX1Q9P291 453 aa17.32■□□□□ 0.36
SS18-208ENST00000577751 PRKAR1BP31321 381 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 KIR2DL2P43627 348 aaPredicted RBP17.31■□□□□ 0.36
SS18-208ENST00000577751 GZMMP51124 257 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 RBBP4Q09028 425 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 CYLC2Q14093 348 aaPredicted RBP17.31■□□□□ 0.36
SS18-208ENST00000577751 MMEL1Q495T6 779 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 SERPINA11Q86U17 422 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 ADGRG3Q86Y34 549 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 DMRTC2Q8IXT2 367 aaPredicted RBP17.31■□□□□ 0.36
SS18-208ENST00000577751 HIPK4Q8NE63 616 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 ATP6V1C2Q8NEY4 427 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 SLC35B4Q969S0 331 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 ARMC7Q9H6L4 198 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 CACYBPQ9HB71 228 aaKnown RBP17.31■□□□□ 0.36
SS18-208ENST00000577751 CTPS2Q9NRF8 586 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 MCTS1Q9ULC4 181 aaKnown RBP17.31■□□□□ 0.36
SS18-208ENST00000577751 UNC79Q9P2D8 2635 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 CRYBG3Q68DQ2 2970 aa17.31■□□□□ 0.36
SS18-208ENST00000577751 MRASO14807 208 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 SNX3O60493 162 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 GKN3PP0CG01 181 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 FKBP2P26885 142 aaKnown RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 SLC1A3P43003 542 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 HTR3AP46098 478 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 PCBP3P57721 371 aaKnown RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 ZNF239Q16600 458 aaKnown RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 MEX3BQ6ZN04 569 aaKnown RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 ZNF550Q7Z398 422 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 KRT73Q86Y46 540 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 C11orf65Q8NCR3 313 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 OR8J3Q8NGG0 315 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 RP9Q8TA86 221 aaKnown RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 SLC25A43Q8WUT9 341 aaPredicted RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 RNASE6Q93091 150 aaKnown RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 CPNE4Q96A23 557 aaPredicted RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 STARD4Q96DR4 205 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 SLC39A3Q9BRY0 314 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 SPATA5L1Q9BVQ7 753 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 SRXN1Q9BYN0 137 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 PRRG4Q9BZD6 226 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 ADAM19Q9H013 955 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 PIGMQ9H3S5 423 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 TIGARQ9NQ88 270 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 CHRNA9Q9UGM1 479 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 FOXD3Q9UJU5 478 aaPredicted RBP17.3■□□□□ 0.36
SS18-208ENST00000577751 OSGIN1Q9UJX0 560 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 PKDREJQ9NTG1 2253 aa17.3■□□□□ 0.36
SS18-208ENST00000577751 A0A1W2PNR3 127 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 GCM2O75603 506 aaPredicted RBP17.29■□□□□ 0.36
SS18-208ENST00000577751 SYNGR4O95473 234 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 UQCRBP14927 111 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 SLC7A1P30825 629 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 RAC3P60763 192 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 GNGT1P63211 74 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 SYT14P1Q58G82 188 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 VWA1Q6PCB0 445 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 DHRS4L2Q6PKH6 230 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 MTDHQ86UE4 582 aaKnown RBP17.29■□□□□ 0.36
SS18-208ENST00000577751 ZZZ3Q8IYH5 903 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 PCYOX1LQ8NBM8 494 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 OR10A6Q8NH74 314 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 SH3GL1Q99961 368 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 NSRP1Q9H0G5 558 aaKnown RBP17.29■□□□□ 0.36
SS18-208ENST00000577751 MYLK2Q9H1R3 596 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 PACSIN3Q9UKS6 424 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 SPIN1Q9Y657 262 aaPredicted RBP17.29■□□□□ 0.36
SS18-208ENST00000577751 CELSR2Q9HCU4 2923 aa17.29■□□□□ 0.36
SS18-208ENST00000577751 CACNA1DQ01668 2161 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 A8MXE2 369 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 SS18L1O75177 396 aaPredicted RBP17.28■□□□□ 0.36
SS18-208ENST00000577751 CGAP01215 116 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 PRG2P13727 222 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 PRF1P14222 555 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 TACR3P29371 465 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 CLK1P49759 484 aaKnown RBP17.28■□□□□ 0.36
SS18-208ENST00000577751 POLR2HP52434 150 aaKnown RBP17.28■□□□□ 0.36
SS18-208ENST00000577751 MAP2K6P52564 334 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 CYP51A1Q16850 503 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 RABL3Q5HYI8 236 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 TMPPEQ6ZT21 453 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 FAM214BQ7L5A3 538 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 BTLAQ7Z6A9 289 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 CALHM3Q86XJ0 350 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 ZNF295-AS1Q8N0V1 137 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 RNF128Q8TEB7 428 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 LRRC46Q96FV0 321 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 GMPPAQ96IJ6 420 aaPredicted RBP17.28■□□□□ 0.36
SS18-208ENST00000577751 OR5B2Q96R09 309 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 ZNF607Q96SK3 696 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 GLRX2Q9NS18 164 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 GID8Q9NWU2 228 aa17.28■□□□□ 0.36
SS18-208ENST00000577751 ANGPT4Q9Y264 503 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms