RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CADM2Q8N3J6 435 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 OR10D3Q8NH80 312 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 OR2V1Q8NHB1 315 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 LILRB4Q8NHJ6 448 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 SLC25A43Q8WUT9 341 aaPredicted RBP13.68□□□□□ -0.22
LITAF-217ENST00000575426 RASSF5Q8WWW0 418 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 OSTF1Q92882 214 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 SLC35B4Q969S0 331 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 REXO5Q96IC2 774 aaKnown RBP13.68□□□□□ -0.22
LITAF-217ENST00000575426 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 EVA1AQ9H8M9 152 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 CTPS2Q9NRF8 586 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 CLCF1Q9UBD9 225 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 ZNF175Q9Y473 711 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 HCFC1P51610 2035 aa13.68□□□□□ -0.22
LITAF-217ENST00000575426 FAM220BPB1ANY3 271 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 PRSS44E7EML9 344 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 DVL2O14641 736 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 ADAMDEC1O15204 470 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 EFNA2O43921 213 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 MFN2O95140 757 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 RCBTB2O95199 551 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 IFNA14P01570 189 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 TMIGD3P0DMS9 266 aaPredicted RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 TFPIP10646 304 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 CXCR1P25024 350 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 CTSSP25774 331 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 ACAA2P42765 397 aaKnown RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 POLR2HP52434 150 aaKnown RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 NCALDP61601 193 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 PLAURQ03405 335 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 PON3Q15166 354 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 EEF1A1P5Q5VTE0 462 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 GTF2IRD2BQ6EKJ0 949 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 WBP2NLQ6ICG8 309 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 OR2A2Q6IF42 318 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 GTF2IRD2Q86UP8 949 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 CALHM3Q86XJ0 350 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 C9orf106Q8NAJ2 232 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 OR2T12Q8NG77 320 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 ZNF524Q96C55 264 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 ZNF845Q96IR2 970 aaPredicted RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 GPATCH1Q9BRR8 931 aaKnown RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 KCNJ16Q9NPI9 418 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 PLEKHB1Q9UF11 243 aaPredicted RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 CHRNA9Q9UGM1 479 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 TAGLN3Q9UI15 199 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 KLF2Q9Y5W3 355 aaPredicted RBP13.67□□□□□ -0.22
LITAF-217ENST00000575426 DOPEY1Q5JWR5 2465 aa13.67□□□□□ -0.22
LITAF-217ENST00000575426 TMED7-TICAM2A0A0A6YYA0 188 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 ELOVL7A1L3X0 281 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CCT8L1PA6NM43 557 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 FAM90A27PA6NNH2 459 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 GSTA4O15217 222 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CXCL13O43927 109 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 TPST1O60507 370 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 ADAM11O75078 769 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 TOXO94900 526 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CLDN1O95832 211 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 FCGR2AP12318 317 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CCNA2P20248 432 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 HTR1EP28566 365 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 TACR3P29371 465 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 OPRM1P35372 400 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CPA2P48052 419 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 MNAT1P51948 309 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 MAP2K6P52564 334 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 SLC7A2P52569 658 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 DLX5P56178 289 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 PCBP3P57721 371 aaKnown RBP13.66□□□□□ -0.22
LITAF-217ENST00000575426 MXRA7P84157 204 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 DMTNQ08495 405 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 VEZF1Q14119 521 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 PLXDC2Q6UX71 529 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 SLC15A3Q8IY34 581 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 BCAS4Q8TDM0 211 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CPNE4Q96A23 557 aaPredicted RBP13.66□□□□□ -0.22
LITAF-217ENST00000575426 INTS12Q96CB8 462 aaKnown RBP13.66□□□□□ -0.22
LITAF-217ENST00000575426 DDIT4LQ96D03 193 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 LRRC46Q96FV0 321 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 OR5B2Q96R09 309 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CHST11Q9NPF2 352 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CMTM6Q9NX76 183 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 ZNF629Q9UEG4 869 aaPredicted RBP13.66□□□□□ -0.22
LITAF-217ENST00000575426 TMED7Q9Y3B3 224 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 CHST2Q9Y4C5 530 aa13.66□□□□□ -0.22
LITAF-217ENST00000575426 UTP20O75691 2785 aaKnown RBP13.65□□□□□ -0.22
LITAF-217ENST00000575426 FRS3O43559 492 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 TGM6O95932 706 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 PLGP00747 810 aaPredicted RBP13.65□□□□□ -0.22
LITAF-217ENST00000575426 OPN1SWP03999 348 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 C8BP07358 591 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 PRG2P13727 222 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 BMP5P22003 454 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 SHC1P29353 583 aa13.65□□□□□ -0.22
LITAF-217ENST00000575426 CLK1P49759 484 aaKnown RBP13.65□□□□□ -0.22
LITAF-217ENST00000575426 ZNF136P52737 540 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms