RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 ACTR6Q9GZN1 396 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 MTHFD2LQ9H903 347 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 GP6Q9HCN6 339 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 EXOSC3Q9NQT5 275 aaKnown RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 ING1Q9UK53 422 aaPredicted RBP23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 GPR52Q9Y2T5 361 aa23.17■■□□□ 1.3
NPLOC4-215ENST00000574095 AGAP5A6NIR3 686 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 SMAD9O15198 467 aaKnown RBP23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 ANP32DO95626 131 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 TFPIP10646 304 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 APOBEC1P41238 236 aaKnown RBP23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 DIO1P49895 249 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 POLR2JP52435 117 aaKnown RBP23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 PPP2R2AP63151 447 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 ADAM8P78325 824 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 RASGEF1BQ0VAM2 473 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 SYT14P1Q58G82 188 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 EPGNQ6UW88 154 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 TMPPEQ6ZT21 453 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 LSRQ86X29 649 aaPredicted RBP23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 VPS33AQ96AX1 596 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 DNAJA3Q96EY1 480 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 UBTD1Q9HAC8 227 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 BCO1Q9HAY6 547 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 KLHL9Q9P2J3 617 aa23.16■■□□□ 1.3
NPLOC4-215ENST00000574095 SULT2B1O00204 365 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 AP3D1O14617 1153 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 KLF4O43474 513 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 GCM2O75603 506 aaPredicted RBP23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 PSMB1P20618 241 aaKnown RBP23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 IDH2P48735 452 aaKnown RBP23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 MVDP53602 400 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 TSC22D1Q15714 1073 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 MAPK11Q15759 364 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 GTDC1Q4AE62 458 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 GRINAQ7Z429 371 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 WFDC8Q8IUA0 241 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 GABRG1Q8N1C3 465 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 MIER2Q8N344 545 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 WDR60Q8WVS4 1066 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 ITCHQ96J02 903 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 RMND5AQ9H871 391 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 VPS13CQ709C8 3753 aa23.15■■□□□ 1.3
NPLOC4-215ENST00000574095 CYTIPO60759 359 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 ETFAP13804 333 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 IL7RP16871 459 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 CCNA2P20248 432 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 CRATP43155 626 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 FOXD4Q12950 439 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 ALKBH2Q6NS38 261 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 ADGRG3Q86Y34 549 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 CMIPQ8IY22 773 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 LRRC8CQ8TDW0 803 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 SLC25A43Q8WUT9 341 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 AURKBQ96GD4 344 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 ATP6V1G3Q96LB4 118 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 C7orf26Q96N11 449 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 ZNF300Q96RE9 604 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 TACO1Q9BSH4 297 aaKnown RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 TPT1P8Q9HAU6 139 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 SLCO1B3Q9NPD5 702 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 BEX4Q9NWD9 120 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 CHRNA9Q9UGM1 479 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 SPIN1Q9Y657 262 aaPredicted RBP23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 PRR14LQ5THK1 2151 aa23.14■■□□□ 1.29
NPLOC4-215ENST00000574095 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 ADAP00813 363 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 FESP07332 822 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 ZCCHC18P0CG32 403 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 RPS4Y1P22090 263 aaKnown RBP23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 CSNK2A1P68400 391 aaPredicted RBP23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 ACKR1Q16570 336 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 TTMPQ5BVD1 217 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 BEX5Q5H9J7 111 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 S100PBPQ96BU1 408 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 ARL5BQ96KC2 179 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 OR11A1Q9GZK7 315 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 OR10A4Q9H209 315 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 P2RX2Q9UBL9 471 aa23.13■■□□□ 1.29
NPLOC4-215ENST00000574095 ZNF814B7Z6K7 855 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 DBIP07108 87 aaKnown RBP23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 GNA13Q14344 377 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 C6orf10Q5SRN2 563 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 SFRP5Q5T4F7 317 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 MRPL2Q5T653 305 aaKnown RBP23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 MSANTD1Q6ZTZ1 278 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 WFDC11Q8NEX6 87 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 STEAP2Q8NFT2 490 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 HDHD5Q9BXW7 423 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 PRSS50Q9UI38 385 aa23.12■■□□□ 1.29
NPLOC4-215ENST00000574095 FAM234BA2RU67 622 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 EDNRAP25101 427 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 OR3A2P47893 321 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 IDH3AP50213 366 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 DSTNP60981 165 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 MTDHQ86UE4 582 aaKnown RBP23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 VRK2Q86Y07 508 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 PEX5LQ8IYB4 626 aa23.11■■□□□ 1.29
NPLOC4-215ENST00000574095 PMM1Q92871 262 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms