RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 LRRK2Q5S007 2527 aa11.5□□□□□ -0.57
TRAPPC1-206ENST00000573989 DOPEY2Q9Y3R5 2298 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 USP9XQ93008 2570 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 MBD3L4A6NDZ8 208 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 MBD3L3A6NE82 208 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 MBD3L5A6NJ08 208 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC22A20A6NK97 555 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CCT8L1PA6NM43 557 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 SYT5O00445 386 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ADAMDEC1O15204 470 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 SYNGR4O95473 234 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CALB2P22676 271 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CXCR1P25024 350 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ACAA2P42765 397 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CPA2P48052 419 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLK1P49759 484 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 SUCLG1P53597 346 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CARD18P57730 90 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 RGS8P57771 180 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 TMEM176BQ3YBM2 270 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 EEF1A1P5Q5VTE0 462 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 HBMQ6B0K9 141 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 PPP4R4Q6NUP7 873 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 C8orf82Q6P1X6 216 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ADGRE4PQ86SQ3 457 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 GGNQ86UU5 652 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 RANBP3LQ86VV4 465 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 MED12LQ86YW9 2145 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 PGAM4Q8N0Y7 254 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CADM2Q8N3J6 435 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 RPRMLQ8N4K4 120 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 MARVELD2Q8N4S9 558 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 SMYD1Q8NB12 490 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ATP6V1C2Q8NEY4 427 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 OR10D3Q8NH80 312 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 MBD3L2Q8NHZ7 208 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ITLN2Q8WWU7 325 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 LZICQ8WZA0 190 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 PROX1Q92786 737 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 DDIT4LQ96D03 193 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 NPAS1Q99742 590 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 KCTD14Q9BQ13 255 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 KLHDC3Q9BQ90 382 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZNF559Q9BR84 538 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 TRIM2Q9C040 744 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 CTPS2Q9NRF8 586 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ADA2Q9NZK5 511 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ABCD2Q9UBJ2 740 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 TESQ9UGI8 421 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 BAG5Q9UL15 447 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 RNF6Q9Y252 685 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 SLC9A8Q9Y2E8 581 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZNF175Q9Y473 711 aa11.49□□□□□ -0.57
TRAPPC1-206ENST00000573989 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 A0A0J9YW62 118 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 NME4O00746 187 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 AP3D1O14617 1153 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 TNFSF11O14788 317 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLDN14O95500 239 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 LGI1O95970 557 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 OPN1SWP03999 348 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 TFPIP10646 304 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 TACR3P29371 465 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 KCNJ5P48544 419 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 PLAURQ03405 335 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 DMTNQ08495 405 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 PON3Q15166 354 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 SYT14P1Q58G82 188 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 GTF2IRD2BQ6EKJ0 949 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 GTF2IRD2Q86UP8 949 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 OR52E4Q8NGH9 312 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 DNAJA4Q8WW22 397 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 CPNE4Q96A23 557 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 TMEM27Q9HBJ8 222 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 CLCF1Q9UBD9 225 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZNF629Q9UEG4 869 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 CHST2Q9Y4C5 530 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 MPDZO75970 2070 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 INTS1Q8N201 2190 aaKnown RBP11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
TRAPPC1-206ENST00000573989 CACNA1CQ13936 2221 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 TMED7-TICAM2A0A0A6YYA0 188 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 H0YC42 278 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 DVL2O14641 736 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 ZNF208O43345 1280 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 FRS3O43559 492 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 EFNA2O43921 213 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 TPST1O60507 370 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 ADAM11O75078 769 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 GCM2O75603 506 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 RCBTB2O95199 551 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 OPN1LWP04000 364 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 CRHP06850 196 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 FESP07332 822 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 IL11P20809 199 aa11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 CEACAM8P31997 349 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC1-206ENST00000573989 KDELR2P33947 212 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms