RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GSNP06396 782 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 UBTFL6P0CB48 400 aaPredicted RBP15.4■□□□□ 0.06
SMG6-212ENST00000573153 IDH3AP50213 366 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 CCR4P51679 360 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 RAC3P60763 192 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 PPP2R2AP63151 447 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 ADAM8P78325 824 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 KCNJ10P78508 379 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 RNPS1Q15287 305 aaKnown RBP15.4■□□□□ 0.06
SMG6-212ENST00000573153 DEFB113Q30KQ7 82 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 TIGD2Q4W5G0 525 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 GPAT3Q53EU6 434 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 ANKRD34AQ69YU3 496 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 TUSC5Q8IXB3 177 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 GOLGA6L1Q8N7Z2 621 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 GTF2H4Q92759 462 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 MTHFD2LQ9H903 347 aaPredicted RBP15.4■□□□□ 0.06
SMG6-212ENST00000573153 BCO1Q9HAY6 547 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 THUMPD1Q9NXG2 353 aaKnown RBP15.4■□□□□ 0.06
SMG6-212ENST00000573153 NF1P21359 2839 aa15.4■□□□□ 0.06
SMG6-212ENST00000573153 IGHV3-15A0A0B4J1V0 119 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 ZNF814B7Z6K7 855 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 FAAHO00519 579 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 PSMB1P20618 241 aaKnown RBP15.39■□□□□ 0.05
SMG6-212ENST00000573153 DNASE1P24855 282 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 HOXC12P31275 282 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 CTBP2P56545 445 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 EXOC3L2Q2M3D2 409 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 PPP4R4Q6NUP7 873 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 FCRLAQ7L513 359 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 SLC25A43Q8WUT9 341 aaPredicted RBP15.39■□□□□ 0.05
SMG6-212ENST00000573153 CKAP2Q8WWK9 683 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 CNOT9Q92600 299 aaKnown RBP15.39■□□□□ 0.05
SMG6-212ENST00000573153 RSPO3Q9BXY4 272 aaPredicted RBP15.39■□□□□ 0.05
SMG6-212ENST00000573153 TPT1P8Q9HAU6 139 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 INTS9Q9NV88 658 aaKnown RBP15.39■□□□□ 0.05
SMG6-212ENST00000573153 CHST2Q9Y4C5 530 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 GMEB1Q9Y692 573 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 ACANP16112 2415 aa15.39■□□□□ 0.05
SMG6-212ENST00000573153 AP3D1O14617 1153 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 PLGP00747 810 aaPredicted RBP15.38■□□□□ 0.05
SMG6-212ENST00000573153 BMP2P12643 396 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 FKBP2P26885 142 aaKnown RBP15.38■□□□□ 0.05
SMG6-212ENST00000573153 APOBEC1P41238 236 aaKnown RBP15.38■□□□□ 0.05
SMG6-212ENST00000573153 ATP4BP51164 291 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 FOXD4Q12950 439 aaPredicted RBP15.38■□□□□ 0.05
SMG6-212ENST00000573153 ABLIM2Q6H8Q1 611 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 BLOC1S3Q6QNY0 202 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 FUNDC1Q8IVP5 155 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 SLC43A2Q8N370 569 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 ARFGAP2Q8N6H7 521 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 ATP6V1C2Q8NEY4 427 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 DYDC1Q8WWB3 177 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 VPS33AQ96AX1 596 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 MAGEB18Q96M61 343 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 EBF4Q9BQW3 602 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 TACO1Q9BSH4 297 aaKnown RBP15.38■□□□□ 0.05
SMG6-212ENST00000573153 MED18Q9BUE0 208 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 PAIP1Q9H074 479 aaKnown RBP15.38■□□□□ 0.05
SMG6-212ENST00000573153 C12orf49Q9H741 205 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 SLC52A3Q9NQ40 469 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 SERINC1Q9NRX5 453 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 CALML5Q9NZT1 146 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 P2RX2Q9UBL9 471 aa15.38■□□□□ 0.05
SMG6-212ENST00000573153 CYTIPO60759 359 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 CYP7B1O75881 506 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 DBIP07108 87 aaKnown RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 TFPTP0C1Z6 253 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 NR2F1P10589 423 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 NTF4P34130 210 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 CLK1P49759 484 aaKnown RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 AQP5P55064 265 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 STX1BP61266 288 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 MERTKQ12866 999 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 GNA13Q14344 377 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 LRIF1Q5T3J3 769 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 DNAJC14Q6Y2X3 702 aaPredicted RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 GRINAQ7Z429 371 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 ADGRG3Q86Y34 549 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 WFDC11Q8NEX6 87 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 PNPT1Q8TCS8 783 aaKnown RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 WDR60Q8WVS4 1066 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 PIK3IP1Q96FE7 263 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 AURKBQ96GD4 344 aaPredicted RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 ZC3HAV1LQ96H79 300 aaKnown RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 REXO5Q96IC2 774 aaKnown RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 ARL5BQ96KC2 179 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 ZNF300Q96RE9 604 aaPredicted RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 TMEM204Q9BSN7 226 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 KLHL4Q9C0H6 718 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 OR10A4Q9H209 315 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 CTPS2Q9NRF8 586 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 EDARQ9UNE0 448 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 PCDHB14Q9Y5E9 798 aa15.37■□□□□ 0.05
SMG6-212ENST00000573153 SPIN1Q9Y657 262 aaPredicted RBP15.37■□□□□ 0.05
SMG6-212ENST00000573153 FLNAP21333 2647 aaKnown RBP15.36■□□□□ 0.05
SMG6-212ENST00000573153 A0A096LPI6 279 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.36■□□□□ 0.05
SMG6-212ENST00000573153 ZNF716A6NP11 495 aa15.36■□□□□ 0.05
SMG6-212ENST00000573153 RAMP1O60894 148 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms