RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 IFNGR1P15260 489 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 STMN1P16949 149 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 HIST1H2ADP20671 130 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 PTAFRP25105 342 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 SERPINB5P36952 375 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 BUD31P41223 144 aaPredicted RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 MAP2K3P46734 347 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 SLC1A6P48664 564 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 DSCR4P56555 118 aaPredicted RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 DNAJB13P59910 316 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 ABCE1P61221 599 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 SNRPD2P62316 118 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 DLG1Q12959 904 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 BIKQ13323 160 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 SLC9A3R2Q15599 337 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 DEFB121Q5J5C9 76 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 OLFML2AQ68BL7 652 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 FAM45BPQ6NSW5 357 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 MRNIPQ6NTE8 343 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 UGT3A1Q6NUS8 523 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 FAM180BQ6P0A1 224 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 NUFIP2Q7Z417 695 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 CARM1Q86X55 608 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 ST13P4Q8IZP2 240 aaPredicted RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 OR4K17Q8NGC6 315 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 OR51F2Q8NH61 342 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 NANPQ8TBE9 248 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 FAM45AQ8TCE6 357 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 UBASH3BQ8TF42 649 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 OMA1Q96E52 524 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 RAX2Q96IS3 184 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 HIST1H2AHQ96KK5 128 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 ZNF48Q96MX3 618 aaPredicted RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 HIST1H2AJQ99878 128 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 MRPL57Q9BQC6 102 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 H2AFJQ9BTM1 129 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 C20orf27Q9GZN8 174 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 NXF5Q9H1B4 397 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 LRMDAQ9H2I8 198 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 CAB39LQ9H9S4 337 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 SMURF1Q9HCE7 757 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 PRDM7Q9NQW5 492 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 INTS10Q9NVR2 710 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 MCTS1Q9ULC4 181 aaKnown RBP6.01□□□□□ -1.45
CHD3-213ENST00000571249 MED16Q9Y2X0 877 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 VWA7Q9Y334 891 aa6.01□□□□□ -1.45
CHD3-213ENST00000571249 PLECQ15149 4684 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 WASHC1A8K0Z3 465 aa6□□□□□ -1.45
CHD3-213ENST00000571249 ZNF814B7Z6K7 855 aa6□□□□□ -1.45
CHD3-213ENST00000571249 M0R1B8 84 aa6□□□□□ -1.45
CHD3-213ENST00000571249 WNT9BO14905 357 aa6□□□□□ -1.45
CHD3-213ENST00000571249 PFDN6O15212 129 aa6□□□□□ -1.45
CHD3-213ENST00000571249 PHGDHO43175 533 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 ITM2AO43736 263 aa6□□□□□ -1.45
CHD3-213ENST00000571249 NPHS1O60500 1241 aa6□□□□□ -1.45
CHD3-213ENST00000571249 SYNGR4O95473 234 aa6□□□□□ -1.45
CHD3-213ENST00000571249 TBX6O95947 436 aaPredicted RBP6□□□□□ -1.45
CHD3-213ENST00000571249 C8GP07360 202 aa6□□□□□ -1.45
CHD3-213ENST00000571249 RBP1P09455 135 aa6□□□□□ -1.45
CHD3-213ENST00000571249 LTA4HP09960 611 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 MYL2P10916 166 aa6□□□□□ -1.45
CHD3-213ENST00000571249 DDX5P17844 614 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 ARRB2P32121 409 aa6□□□□□ -1.45
CHD3-213ENST00000571249 TIAL1Q01085 375 aaKnown RBP eCLIP6□□□□□ -1.45
CHD3-213ENST00000571249 TNFRSF17Q02223 184 aa6□□□□□ -1.45
CHD3-213ENST00000571249 PLCXD2Q0VAA5 305 aa6□□□□□ -1.45
CHD3-213ENST00000571249 GALNT1Q10472 559 aaPredicted RBP6□□□□□ -1.45
CHD3-213ENST00000571249 ZP4Q12836 540 aa6□□□□□ -1.45
CHD3-213ENST00000571249 RIPK1Q13546 671 aa6□□□□□ -1.45
CHD3-213ENST00000571249 HLXQ14774 488 aaPredicted RBP6□□□□□ -1.45
CHD3-213ENST00000571249 TBCCQ15814 346 aa6□□□□□ -1.45
CHD3-213ENST00000571249 FAM83EQ2M2I3 478 aa6□□□□□ -1.45
CHD3-213ENST00000571249 ADPRMQ3LIE5 342 aa6□□□□□ -1.45
CHD3-213ENST00000571249 CT83Q5H943 113 aa6□□□□□ -1.45
CHD3-213ENST00000571249 TECRLQ5HYJ1 363 aa6□□□□□ -1.45
CHD3-213ENST00000571249 DMRTC1Q5HYR2 192 aa6□□□□□ -1.45
CHD3-213ENST00000571249 TIMM23BQ5SRD1 257 aa6□□□□□ -1.45
CHD3-213ENST00000571249 RBM20Q5T481 1227 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 LIPMQ5VYY2 423 aa6□□□□□ -1.45
CHD3-213ENST00000571249 METTL21CQ5VZV1 264 aa6□□□□□ -1.45
CHD3-213ENST00000571249 LRRC8EQ6NSJ5 796 aa6□□□□□ -1.45
CHD3-213ENST00000571249 KLHL17Q6TDP4 642 aa6□□□□□ -1.45
CHD3-213ENST00000571249 MEPCEQ7L2J0 689 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 DOK3Q7L591 496 aa6□□□□□ -1.45
CHD3-213ENST00000571249 GALNT10Q86SR1 603 aa6□□□□□ -1.45
CHD3-213ENST00000571249 TBC1D1Q86TI0 1168 aaPredicted RBP6□□□□□ -1.45
CHD3-213ENST00000571249 GGNQ86UU5 652 aa6□□□□□ -1.45
CHD3-213ENST00000571249 ZNF615Q8N8J6 731 aa6□□□□□ -1.45
CHD3-213ENST00000571249 ACOT4Q8N9L9 421 aa6□□□□□ -1.45
CHD3-213ENST00000571249 TTLQ8NG68 377 aa6□□□□□ -1.45
CHD3-213ENST00000571249 OR52B6Q8NGF0 335 aa6□□□□□ -1.45
CHD3-213ENST00000571249 OR10D3Q8NH80 312 aa6□□□□□ -1.45
CHD3-213ENST00000571249 CD200R1Q8TD46 325 aa6□□□□□ -1.45
CHD3-213ENST00000571249 SLC25A28Q96A46 364 aa6□□□□□ -1.45
CHD3-213ENST00000571249 SLC7A6OSQ96CW6 309 aaPredicted RBP6□□□□□ -1.45
CHD3-213ENST00000571249 CCDC126Q96EE4 140 aa6□□□□□ -1.45
CHD3-213ENST00000571249 F2RL3Q96RI0 385 aa6□□□□□ -1.45
CHD3-213ENST00000571249 GPR21Q99679 349 aa6□□□□□ -1.45
CHD3-213ENST00000571249 PELOQ9BRX2 385 aaKnown RBP6□□□□□ -1.45
CHD3-213ENST00000571249 TMEM120AQ9BXJ8 343 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms