RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NCF2P19878 526 aaPredicted RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 APOBEC1P41238 236 aaKnown RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 CTBP2P56545 445 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 RAC3P60763 192 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 GNA13Q14344 377 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 LIN52Q52LA3 116 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 SYT14P1Q58G82 188 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 FCRLAQ7L513 359 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 GRINAQ7Z429 371 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 LSRQ86X29 649 aaPredicted RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 LURAP1LQ8IV03 231 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 PEX5LQ8IYB4 626 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 C10orf111Q8N326 155 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 OR52P1PQ8NH57 321 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 SLC25A43Q8WUT9 341 aaPredicted RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 MAL2Q969L2 176 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 REXO5Q96IC2 774 aaKnown RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 DACH2Q96NX9 599 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 POLDIP3Q9BY77 421 aaKnown RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 RABEP2Q9H5N1 569 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 A4GALTQ9NPC4 353 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 PLSCR4Q9NRQ2 329 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 SERINC1Q9NRX5 453 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 RLIMQ9NVW2 624 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 ELOVL5Q9NYP7 299 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 CHRNA9Q9UGM1 479 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF443Q9Y2A4 671 aaPredicted RBP11.63□□□□□ -0.55
CNOT1-220ENST00000569916 TESMINQ9Y4I5 508 aa11.63□□□□□ -0.55
CNOT1-220ENST00000569916 IGHV3-15A0A0B4J1V0 119 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 A0A0G2JPF8 293 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 TMEM247A6NEH6 219 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 CFAP73A6NFT4 308 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 HNRNPCL2B2RXH8 293 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 HNRNPCL3B7ZW38 293 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 SMAD9O15198 467 aaKnown RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 HNRNPCL1O60812 293 aaKnown RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 THBS1P07996 1170 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 PABPC4LP0CB38 370 aaKnown RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 HNRNPCL4P0DMR1 293 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 POU2F1P14859 743 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 KLK2P20151 261 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 ENPP1P22413 925 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 UGT2B10P36537 528 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 IDH2P48735 452 aaKnown RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 EPS8Q12929 822 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 RNPS1Q15287 305 aaKnown RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 RNF220Q5VTB9 566 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 PRAMEF8Q5VWM4 474 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 PRAMEF7Q5VXH5 474 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 GTF2IRD2BQ6EKJ0 949 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 CGB2Q6NT52 195 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 GTF2IRD2Q86UP8 949 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 ADGRG3Q86Y34 549 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 NRGNQ92686 78 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 TMEM120AQ9BXJ8 343 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 CLEC4MQ9H2X3 399 aaPredicted RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 IKZF5Q9H5V7 419 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 BCL2L10Q9HD36 194 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 KLHL13Q9P2N7 655 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 ING1Q9UK53 422 aaPredicted RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 TRIM33Q9UPN9 1127 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 SPIN1Q9Y657 262 aaPredicted RBP11.62□□□□□ -0.55
CNOT1-220ENST00000569916 AKAP9Q99996 3911 aa11.62□□□□□ -0.55
CNOT1-220ENST00000569916 UQCRHLA0A096LP55 91 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 PRKD3O94806 890 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 GOSR1O95249 250 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 ARAFP10398 606 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 PPIBP23284 216 aaKnown RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 ACAA2P42765 397 aaKnown RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 HTR3AP46098 478 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 KCNJ5P48544 419 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 DIO1P49895 249 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 POLR2HP52434 150 aaKnown RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 LARS2Q15031 903 aaKnown RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 GCNT6Q5T4J0 391 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 TMPPEQ6ZT21 453 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 NUFIP2Q7Z417 695 aaKnown RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 TUSC5Q8IXB3 177 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 ZNF440Q8IYI8 595 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 SLC43A2Q8N370 569 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 CLIP4Q8N3C7 705 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 BBS10Q8TAM1 723 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 ARL5BQ96KC2 179 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 PSD2Q9BQI7 771 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 CPPED1Q9BRF8 314 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 SPATA9Q9BWV2 254 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 OR11A1Q9GZK7 315 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 C12orf49Q9H741 205 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 GP6Q9HCN6 339 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 FGFR1OP2Q9NVK5 253 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 KLHL28Q9NXS3 571 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 NDRG3Q9UGV2 375 aa11.61□□□□□ -0.55
CNOT1-220ENST00000569916 LEF1Q9UJU2 399 aaPredicted RBP11.61□□□□□ -0.55
CNOT1-220ENST00000569916 OSGIN1Q9UJX0 560 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms