RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 HIVEP3Q5T1R4 2406 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 POLEQ07864 2286 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 TMED7-TICAM2A0A0A6YYA0 188 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 CCT8L1PA6NM43 557 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 EFNA2O43921 213 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 FAM107AO95990 144 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 FCGR2AP12318 317 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 PRG2P13727 222 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 CTSSP25774 331 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 GRNP28799 593 aaKnown RBP11.51□□□□□ -0.57
CDT1-203ENST00000569140 TACR3P29371 465 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 PRDX6P30041 224 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 PRKAR1BP31321 381 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 PCGF2P35227 344 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 APOBEC1P41238 236 aaKnown RBP11.51□□□□□ -0.57
CDT1-203ENST00000569140 HTR3AP46098 478 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 POLR2HP52434 150 aaKnown RBP11.51□□□□□ -0.57
CDT1-203ENST00000569140 ZSWIM7Q19AV6 140 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 SLC25A53Q5H9E4 307 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 AP1ARQ63HQ0 302 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 ERICH5Q6P6B1 374 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 NET1Q7Z628 596 aaPredicted RBP11.51□□□□□ -0.57
CDT1-203ENST00000569140 ARPINQ7Z6K5 226 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 PIGWQ7Z7B1 504 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 LSRQ86X29 649 aaPredicted RBP11.51□□□□□ -0.57
CDT1-203ENST00000569140 LIX1LQ8IVB5 337 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 CCDC197Q8NCU1 140 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 OSTF1Q92882 214 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 CHRNA9Q9UGM1 479 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 ADAM21Q9UKJ8 722 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 USP22Q9UPT9 525 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 TMED7Q9Y3B3 224 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 MED12Q93074 2177 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 BAHCC1Q9P281 2608 aa11.51□□□□□ -0.57
CDT1-203ENST00000569140 FAM220BPB1ANY3 271 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 M0QX08 132 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 GSTA4O15217 222 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 TPST1O60507 370 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 DNAJA2O60884 412 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 SMNDC1O75940 238 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDT1-203ENST00000569140 RCBTB2O95199 551 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 NTN1O95631 604 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 CXCR1P25024 350 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 CEACAM8P31997 349 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 SLC1A3P43003 542 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 SLC7A2P52569 658 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 ZNF136P52737 540 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 RGS8P57771 180 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 DMTNQ08495 405 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 FOXF2Q12947 444 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 CTU2Q2VPK5 515 aaKnown RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 SLC25A35Q3KQZ1 300 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 GLIPR1L2Q4G1C9 344 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 LRRC23Q53EV4 343 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 SYT14P1Q58G82 188 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 WBP2NLQ6ICG8 309 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 OR2A2Q6IF42 318 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 DHRS4L2Q6PKH6 230 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 ADGRE4PQ86SQ3 457 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 PATL1Q86TB9 770 aaKnown RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 ANKS4BQ8N8V4 417 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 BHLHE22Q8NFJ8 381 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 OR2T12Q8NG77 320 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 LILRB4Q8NHJ6 448 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 VANGL1Q8TAA9 524 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 ROBO4Q8WZ75 1007 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 DDIT4LQ96D03 193 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 SRXN1Q9BYN0 137 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 FAM53CQ9NYF3 392 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 CLEC4AQ9UMR7 237 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 ZNF175Q9Y473 711 aa11.5□□□□□ -0.57
CDT1-203ENST00000569140 KLF2Q9Y5W3 355 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 NCOA6Q14686 2063 aaPredicted RBP11.5□□□□□ -0.57
CDT1-203ENST00000569140 IGHV3-15A0A0B4J1V0 119 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 TMEM72A0PK05 275 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 M0R3H8 397 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 SULT2B1O00204 365 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 NDUFAB1O14561 156 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 ADAMDEC1O15204 470 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 AQP8O94778 261 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 MFN2O95140 757 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 UQCRC1P31930 480 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 OPRM1P35372 400 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 ACAA2P42765 397 aaKnown RBP11.49□□□□□ -0.57
CDT1-203ENST00000569140 GZMMP51124 257 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 CTBP2P56545 445 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 LIPEQ05469 1076 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 SP5Q6BEB4 398 aaPredicted RBP11.49□□□□□ -0.57
CDT1-203ENST00000569140 LUZP2Q86TE4 346 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 RANBP3LQ86VV4 465 aaPredicted RBP11.49□□□□□ -0.57
CDT1-203ENST00000569140 MICU2Q8IYU8 434 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 RELL2Q8NC24 303 aaPredicted RBP11.49□□□□□ -0.57
CDT1-203ENST00000569140 OR52E4Q8NGH9 312 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 CPNE4Q96A23 557 aaPredicted RBP11.49□□□□□ -0.57
CDT1-203ENST00000569140 LRRC46Q96FV0 321 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 ADGRG7Q96K78 797 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 ZFP3Q96NJ6 502 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 UCN2Q96RP3 112 aa11.49□□□□□ -0.57
CDT1-203ENST00000569140 HOPXQ9BPY8 73 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms