RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	GGTLC2	Q14390	218 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	ZNF141	Q15928	474 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.69	□□□□□ -0.54
PKM-222	ENST00000568883	TMEFF1	Q8IYR6	380 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	FAM98A	Q8NCA5	519 aa	Known RBP	11.69	□□□□□ -0.54
PKM-222	ENST00000568883	PHYHIP	Q92561	330 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	AKAP1	Q92667	903 aa	Known RBP eCLIP	11.69	□□□□□ -0.54	2e-15	■■■□□ 15.1
PKM-222	ENST00000568883	RNF31	Q96EP0	1072 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	SGTB	Q96EQ0	304 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	RBM18	Q96H35	190 aa	Known RBP	11.69	□□□□□ -0.54
PKM-222	ENST00000568883	CCNL2	Q96S94	520 aa	Predicted RBP	11.69	□□□□□ -0.54
PKM-222	ENST00000568883	THAP7	Q9BT49	309 aa	Predicted RBP	11.69	□□□□□ -0.54
PKM-222	ENST00000568883	WAC	Q9BTA9	647 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	MFRP	Q9BY79	579 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	PBX4	Q9BYU1	374 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	ENKD1	Q9H0I2	346 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	SEMA6C	Q9H3T2	930 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883		Q9N2J8	555 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	KLHL1	Q9NR64	748 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	TMEM74B	Q9NUR3	256 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	EVA1B	Q9NVM1	165 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883	RASD1	Q9Y272	281 aa		11.69	□□□□□ -0.54
PKM-222	ENST00000568883		A0A0G2JMP0	313 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883		A0A0X1KG70	313 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	OR5K3	A6NET4	321 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ANKRD61	A6NGH8	418 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	EFCAB7	A8K855	629 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	PRAMEF2	O60811	474 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	TMEM127	O75204	238 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	SC5D	O75845	299 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	GATB	O75879	557 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	DHFR	P00374	187 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	RNH1	P13489	461 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ARSB	P15848	533 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	PYCR1	P32322	319 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CRYZ	Q08257	329 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	STX4	Q12846	297 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CCDC85B	Q15834	202 aa	Predicted RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CCDC58	Q4VC31	144 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ACSM3	Q53FZ2	586 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	SLC35D3	Q5M8T2	416 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	C9orf50	Q5SZB4	431 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	FAAH2	Q6GMR7	532 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ZNF440	Q8IYI8	595 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	OR4M2	Q8NGB6	313 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	OR4M1	Q8NGD0	313 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	TRMT10A	Q8TBZ6	339 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ZFAND1	Q8TCF1	268 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	OIT3	Q8WWZ8	545 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	RIT1	Q92963	219 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	UPRT	Q96BW1	309 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ERMAP	Q96PL5	475 aa	Predicted RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	FYTTD1	Q96QD9	318 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	TNFRSF13C	Q96RJ3	184 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	GDF15	Q99988	308 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	C8orf33	Q9H7E9	229 aa	Predicted RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	MCCC2	Q9HCC0	563 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	FLRT3	Q9NZU0	649 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	USP36	Q9P275	1121 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CLCA3P	Q9Y6N3	262 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	NOTO	A8MTQ0	251 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CLDN4	O14493	209 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	RDH16	O75452	317 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	SEMA4F	O95754	770 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	SLC6A1	P30531	599 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	THBS2	P35442	1172 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ACAA2	P42765	397 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	LSS	P48449	732 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	PSG6	Q00889	435 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	HSF2	Q03933	536 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	FAP	Q12884	760 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	FGFBP1	Q14512	234 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	PON3	Q15166	354 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ISX	Q2M1V0	245 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	HSD17B12	Q53GQ0	312 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	YIF1B	Q5BJH7	314 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ZNF438	Q7Z4V0	828 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ABI3BP	Q7Z7G0	1075 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ZNF595	Q8IYB9	648 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	YIPF7	Q8N8F6	280 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	AVL9	Q8NBF6	648 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	DOK4	Q8TEW6	326 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	PGLYRP3	Q96LB9	341 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CMTM3	Q96MX0	182 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	C7orf50	Q9BRJ6	194 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	GTPBP2	Q9BX10	602 aa	Known RBP	11.68	□□□□□ -0.54
PKM-222	ENST00000568883	SLC19A3	Q9BZV2	496 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	CAPN10	Q9HC96	672 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	COPZ2	Q9P299	210 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	MSRA	Q9UJ68	235 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	ZMIZ1	Q9ULJ6	1067 aa		11.68	□□□□□ -0.54
PKM-222	ENST00000568883	SYNDIG1L	A6NDD5	238 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	OGG1	O15527	345 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	FLRT2	O43155	660 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	EIF4E	P06730	217 aa	Known RBP	11.67	□□□□□ -0.54
PKM-222	ENST00000568883	CTSE	P14091	401 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	AHCY	P23526	432 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	GZMK	P49863	264 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	OR12D2	P58182	307 aa		11.67	□□□□□ -0.54
PKM-222	ENST00000568883	E2F1	Q01094	437 aa		11.67	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms