RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 CUL3Q13618 768 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CCNIQ14094 377 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 RNASEH2BQ5TBB1 312 aaKnown RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 LIPNQ5VXI9 398 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 BHLHB9Q6PI77 547 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CCDC137Q6PK04 289 aaKnown RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 C12orf54Q6X4T0 127 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 NUDT13Q86X67 352 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 MEX3DQ86XN8 651 aaKnown RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 MYLK4Q86YV6 388 aaPredicted RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 SPARTQ8N0X7 666 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 ZNF619Q8N2I2 560 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 METTL25Q8N6Q8 603 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 ZNF525Q8N782 197 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 GBP7Q8N8V2 638 aaPredicted RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 FADS6Q8N9I5 356 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 STEAP2Q8NFT2 490 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 OR2M3Q8NG83 312 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 OR4K17Q8NGC6 315 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 OR52R1Q8NGF1 315 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 ACTRT2Q8TDY3 377 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 PMM1Q92871 262 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 EXT2Q93063 718 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 R3HDM4Q96D70 268 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CFAP36Q96G28 342 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 GMPPAQ96IJ6 420 aaPredicted RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 PRRG4Q9BZD6 226 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 STMN4Q9H169 189 aaPredicted RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 TMPRSS5Q9H3S3 457 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 DSN1Q9H410 356 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CAB39LQ9H9S4 337 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 POPDC3Q9HBV1 291 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 NGBQ9NPG2 151 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 FANCFQ9NPI8 374 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 SMYD2Q9NRG4 433 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 FAIMQ9NVQ4 179 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CISD1Q9NZ45 108 aaKnown RBP4.97□□□□□ -1.61
CDH13-211ENST00000568770 MAT2BQ9NZL9 334 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 MED11Q9P086 117 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 ZNF639Q9UID6 485 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CHMP2BQ9UQN3 213 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 CFL2Q9Y281 166 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 PLLPQ9Y342 182 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 DMRT1Q9Y5R6 373 aa4.97□□□□□ -1.61
CDH13-211ENST00000568770 OR2M5A3KFT3 312 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 DPRXA6NFQ7 191 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 LINC00473A8K010 186 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 K7EPI3 171 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 TCF21O43680 179 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 SCO2O43819 266 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 TSPAN2O60636 221 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 NME6O75414 186 aaPredicted RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 GCM2O75603 506 aaPredicted RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 NTN1O95631 604 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 ATP1B1P05026 303 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 KLK1P06870 262 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 CD1DP15813 335 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 SLC25A16P16260 332 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 ITGA2P17301 1181 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 EGR1P18146 543 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 HNF1AP20823 631 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 IL12BP29460 328 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 DEKP35659 375 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 KRT20P35900 424 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 FEN1P39748 380 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 ZNF75DP51815 510 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 PNLIPRP2P54317 469 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 SLC12A2P55011 1212 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 C21orf58P58505 322 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 GPX6P59796 221 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 RPS3AP61247 264 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 SQLEQ14534 574 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 GANABQ14697 944 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 SLMAPQ14BN4 828 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 LTB4RQ15722 352 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 TAB1Q15750 504 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 TRMT12Q53H54 448 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 FAM166AQ6J272 317 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 MFSD12Q6NUT3 480 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 FAM180BQ6P0A1 224 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 USP51Q70EK9 711 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 LRRC70Q7Z2Q7 622 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 RNF138Q8WVD3 245 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 HSD17B8Q92506 261 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 EFHD2Q96C19 240 aaPredicted RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 MS4A14Q96JA4 679 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 PBKQ96KB5 322 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 ADAD1Q96M93 576 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 NAP1L3Q99457 506 aaPredicted RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 LRRC1Q9BTT6 524 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 ALG8Q9BVK2 526 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 CACNG6Q9BXT2 260 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 HDHD5Q9BXW7 423 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 EML4Q9HC35 981 aaKnown RBP4.96□□□□□ -1.62
CDH13-211ENST00000568770 OPTCQ9UBM4 332 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 PRODH2Q9UF12 536 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 ASIC3Q9UHC3 531 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 CES1P1Q9UKY3 287 aa4.96□□□□□ -1.62
CDH13-211ENST00000568770 KCNS2Q9ULS6 477 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms