RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NRBF2Q96F24 287 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ALPK1Q96QP1 1244 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ANGPTL4Q9BY76 406 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 KLHL4Q9C0H6 718 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 VCXQ9H320 206 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ANKRD19PQ9H560 264 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ZNF552Q9H707 407 aaPredicted RBP10.09□□□□□ -0.79
SF3B3-205ENST00000564899 COQ10BQ9H8M1 238 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 MAN2C1Q9NTJ4 1040 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 SACM1LQ9NTJ5 587 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 PLA2G3Q9NZ20 509 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 SELENONQ9NZV5 590 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 MED11Q9P086 117 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 SLC7A7Q9UM01 511 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 ICAM5Q9UMF0 924 aa10.09□□□□□ -0.79
SF3B3-205ENST00000564899 OR5H15A6NDH6 313 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 ANKUB1A6NFN9 424 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 SOCS2O14508 198 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 EI24O14681 340 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 GNB5O14775 395 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 SNPHO15079 494 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 PEX1O43933 1283 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 SLC25A12O75746 678 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 CEACAM4O75871 244 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 NEURL1O76050 574 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 CCNB2O95067 398 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 SNX4O95219 450 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 THY1P04216 161 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 MSX1P28360 303 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 HMGA2P52926 109 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 ARG2P78540 354 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 QPRTQ15274 297 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 WBP2NLQ6ICG8 309 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 SPINK14Q6IE38 97 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 PACS2Q86VP3 889 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 OR10G2Q8NGC3 310 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 GIPC3Q8TF64 312 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 DNAJA4Q8WW22 397 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-205ENST00000564899 SLC38A4Q969I6 547 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM41AQ96HV5 264 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 FRMD6Q96NE9 622 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 BARD1Q99728 777 aaKnown RBP10.08□□□□□ -0.8
SF3B3-205ENST00000564899 KLHDC3Q9BQ90 382 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 TACO1Q9BSH4 297 aaKnown RBP10.08□□□□□ -0.8
SF3B3-205ENST00000564899 RNF32Q9H0A6 362 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 GABARAPL1Q9H0R8 117 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 PROK2Q9HC23 129 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 PDP1Q9P0J1 537 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-205ENST00000564899 KIF17Q9P2E2 1029 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
SF3B3-205ENST00000564899 MAGED1Q9Y5V3 778 aaPredicted RBP10.08□□□□□ -0.8
SF3B3-205ENST00000564899 ITPR3Q14573 2671 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SETD2Q9BYW2 2564 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 EXPH5Q8NEV8 1989 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 A0A0G2JMM0 328 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 A0A1W2PPB8 328 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 A0A1W2PRS3 328 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 KIR3DP1A8MWS1 328 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 FAM47E-STBD1D6RA91 191 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 CHP2O43745 196 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 CDC40O60508 579 aaKnown RBP eCLIP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 LYPD3O95274 346 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 RASAL1O95294 804 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 POU3F2P20265 443 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 PRKACGP22612 351 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 MST1P26927 711 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SLC1A3P43003 542 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 DNASE1L1P49184 302 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 DAG1Q14118 895 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SEC23BQ15437 767 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 INPP5JQ15735 1006 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 TOMM34Q15785 309 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 MICAQ29983 383 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ALG10BQ5I7T1 473 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 PPP4R4Q6NUP7 873 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 PODNL1Q6PEZ8 512 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ULK3Q6PHR2 472 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 TBPL2Q6SJ96 375 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 IZUMO2Q6UXV1 221 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF730Q6ZMV8 503 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 NKAIN4Q8IVV8 208 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 GALNT4Q8N4A0 578 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 PACRGLQ8N7B6 248 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 FADS6Q8N9I5 356 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 WDSUB1Q8N9V3 476 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ATG16L2Q8NAA4 619 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 OR2M3Q8NG83 312 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 OR9Q2Q8NGE9 314 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SLC7A13Q8TCU3 470 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 GPR119Q8TDV5 335 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 TMEM255BQ8WV15 326 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ACOT11Q8WXI4 607 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 C3orf49Q96BT1 292 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 NTNG2Q96CW9 530 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 MPP4Q96JB8 637 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 ZNF597Q96LX8 424 aa10.07□□□□□ -0.8
SF3B3-205ENST00000564899 JSRP1Q96MG2 331 aaPredicted RBP10.07□□□□□ -0.8
SF3B3-205ENST00000564899 SIGLEC12Q96PQ1 595 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms