RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TLN2Q9Y4G6 2542 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 HMGN4O00479 90 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 RFXANKO14593 260 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 SMAD7O15105 426 aaKnown RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 UBDO15205 165 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 TMCC2O75069 709 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 GCM2O75603 506 aaPredicted RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 GSNP06396 782 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 GUSBP08236 651 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 UBTFL6P0CB48 400 aaPredicted RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 TXNL4AP83876 142 aaKnown RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 SELENBP1Q13228 472 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 RNPS1Q15287 305 aaKnown RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 TMEM176BQ3YBM2 270 aaPredicted RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 TTMPQ5BVD1 217 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 TMEM201Q5SNT2 666 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 FRRS1Q6ZNA5 592 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 EIF3MQ7L2H7 374 aaKnown RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 NUFIP2Q7Z417 695 aaKnown RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 TUSC5Q8IXB3 177 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 ZNF611Q8N823 705 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 STEAP2Q8NFT2 490 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 ABHD3Q8WU67 409 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 C7orf26Q96N11 449 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 LAT2Q9GZY6 243 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 GP6Q9HCN6 339 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 SDR39U1Q9NRG7 319 aaPredicted RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 ZNF701Q9NV72 531 aaPredicted RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 ARGLU1Q9NWB6 273 aaPredicted RBP16.45■□□□□ 0.22
CLN6-204ENST00000564752 SLC35A3Q9Y2D2 325 aa16.45■□□□□ 0.22
CLN6-204ENST00000564752 HS3ST1O14792 307 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 PRKD3O94806 890 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 NTN1O95631 604 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 C1QCP02747 245 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 MAPK14Q16539 360 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 TFAP2EQ6VUC0 442 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 FCRLAQ7L513 359 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 GABRG1Q8N1C3 465 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 ATP6V1C2Q8NEY4 427 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 PNPT1Q8TCS8 783 aaKnown RBP16.44■□□□□ 0.22
CLN6-204ENST00000564752 ZFP90Q8TF47 636 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 TMEM171Q8WVE6 324 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 DYDC1Q8WWB3 177 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 S100PBPQ96BU1 408 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 ZNF524Q96C55 264 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 THUMPD3Q9BV44 507 aaKnown RBP16.44■□□□□ 0.22
CLN6-204ENST00000564752 SAP130Q9H0E3 1048 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 KLHL13Q9P2N7 655 aa16.44■□□□□ 0.22
CLN6-204ENST00000564752 RAI1Q7Z5J4 1906 aaPredicted RBP16.44■□□□□ 0.22
CLN6-204ENST00000564752 USF3Q68DE3 2245 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 PRR14LQ5THK1 2151 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
CLN6-204ENST00000564752 H6PDO95479 791 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 ANP32DO95626 131 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 CNOT4O95628 575 aaKnown RBP16.43■□□□□ 0.22
CLN6-204ENST00000564752 KRT75O95678 551 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 YES1P07947 543 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 PGCP20142 388 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 SLC7A1P30825 629 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 TIGD2Q4W5G0 525 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 SLC25A53Q5H9E4 307 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 C3orf33Q6P1S2 294 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 EPGNQ6UW88 154 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 HDXQ7Z353 690 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 HMGN2P46Q86SG4 172 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 MIER2Q8N344 545 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 OR9I1Q8NGQ6 314 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 TMEM234Q8WY98 164 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 ST8SIA1Q92185 356 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 TRNT1Q96Q11 434 aaKnown RBP16.43■□□□□ 0.22
CLN6-204ENST00000564752 CXorf56Q9H5V9 222 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 RMND5AQ9H871 391 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 COQ10BQ9H8M1 238 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 SLCO1B3Q9NPD5 702 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 LIPT1Q9Y234 373 aa16.43■□□□□ 0.22
CLN6-204ENST00000564752 PRAMEF27A3QJZ7 478 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 ETV2O00321 342 aaPredicted RBP16.42■□□□□ 0.22
CLN6-204ENST00000564752 PGM1P36871 562 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 POLR2JP52435 117 aaKnown RBP16.42■□□□□ 0.22
CLN6-204ENST00000564752 STX1BP61266 288 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 CHRNEQ04844 493 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 TSC22D1Q15714 1073 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 SYPL1Q16563 259 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 COX20Q5RI15 118 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 SFRP5Q5T4F7 317 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 ADAM5Q6NVV9 412 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 MSANTD1Q6ZTZ1 278 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 SLC43A2Q8N370 569 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 ANKFN1Q8N957 763 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 FAM71CQ8NEG0 241 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 AKAP1Q92667 903 aaKnown RBP eCLIP16.42■□□□□ 0.22
CLN6-204ENST00000564752 TACO1Q9BSH4 297 aaKnown RBP16.42■□□□□ 0.22
CLN6-204ENST00000564752 QRSL1Q9H0R6 528 aaKnown RBP16.42■□□□□ 0.22
CLN6-204ENST00000564752 TCF7L2Q9NQB0 619 aa16.42■□□□□ 0.22
CLN6-204ENST00000564752 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.42■□□□□ 0.22
CLN6-204ENST00000564752 HIVEP2P31629 2446 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 HMGB1P1B2RPK0 211 aaPredicted RBP16.41■□□□□ 0.22
CLN6-204ENST00000564752 DNAJA2O60884 412 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 CHRM4P08173 479 aa16.41■□□□□ 0.22
CLN6-204ENST00000564752 NR2F1P10589 423 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms