RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 WFDC6Q9BQY6 131 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 LRFN3Q9BTN0 628 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 ZNF350Q9GZX5 532 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 REEP1Q9H902 201 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 COPS3Q9UNS2 423 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 SAMHD1Q9Y3Z3 626 aaKnown RBP16.33■□□□□ 0.2
GDE1-203ENST00000564172 ENPP4Q9Y6X5 453 aa16.33■□□□□ 0.2
GDE1-203ENST00000564172 GXYLT2A0PJZ3 443 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 EPPINO95925 133 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 AK1P00568 194 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ALPPP05187 535 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ADORA3P0DMS8 318 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ZNF28P17035 718 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 DNAJA1P31689 397 aaKnown RBP16.32■□□□□ 0.2
GDE1-203ENST00000564172 E2F1Q01094 437 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 EPS8Q12929 822 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ILKQ13418 452 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ZNF124Q15973 351 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ZNF311Q5JNZ3 666 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 SHQ1Q6PI26 577 aaKnown RBP16.32■□□□□ 0.2
GDE1-203ENST00000564172 HIPK1Q86Z02 1210 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 P3H2Q8IVL5 708 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ZNF680Q8NEM1 530 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 OR4D11Q8NGI4 311 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 FBXO34Q9NWN3 711 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 ZNF224Q9NZL3 707 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 NCDNQ9UBB6 729 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
GDE1-203ENST00000564172 J3KTA2 159 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 STX11O75558 287 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 LGI1O95970 557 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 TP53P04637 393 aaPredicted RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 ALPLP05186 524 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 PRKACGP22612 351 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 ALDH3A2P51648 485 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 INSM1Q01101 510 aaPredicted RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 DAG1Q14118 895 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 TAB1Q15750 504 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 BTBD16Q32M84 506 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 LCN10Q6JVE6 187 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 FIGNL1Q6PIW4 674 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 TFAP2EQ6VUC0 442 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 VRK2Q86Y07 508 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 PRRX2Q99811 253 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 PINK1Q9BXM7 581 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 SAP130Q9H0E3 1048 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 AKIRIN1Q9H9L7 192 aaPredicted RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 C14orf105Q9NVL8 296 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 B4E171 279 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 ADAMDEC1O15204 470 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 LRP3O75074 770 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 RFPL3O75679 317 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 CT45A8P0DMV1 189 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 CT45A9P0DMV2 189 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 RHCEP18577 417 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 FPR1P21462 350 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 TSPAN7P41732 249 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 GPR68Q15743 365 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 CT45A2Q5DJT8 189 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 NRARPQ7Z6K4 114 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 RBM45Q8IUH3 476 aaKnown RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 AMER2Q8N7J2 671 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 ZNF321PQ8N8H1 164 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 OR52P1PQ8NH57 321 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 ZNF566Q969W8 418 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 BARD1Q99728 777 aaKnown RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 HDHD5Q9BXW7 423 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 OR8D2Q9GZM6 311 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 SMURF2Q9HAU4 748 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 AKAP7Q9P0M2 348 aaPredicted RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 PRODH2Q9UF12 536 aa16.31■□□□□ 0.2
GDE1-203ENST00000564172 EP300Q09472 2414 aaPredicted RBP16.31■□□□□ 0.2
GDE1-203ENST00000564172 COL27A1Q8IZC6 1860 aaPredicted RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 VSTM2BA6NLU5 285 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 DDAH2O95865 285 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 IGKV3-11P04433 115 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 SLC37A1P57057 533 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 EMX1Q04741 257 aaPredicted RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 LAPTM4AQ15012 233 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 TCTN3Q6NUS6 607 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 NPSR1Q6W5P4 371 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 LANCL3Q6ZV70 420 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 ZNF619Q8N2I2 560 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 OR4N2Q8NGD1 307 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 SLC2A12Q8TD20 617 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 C6orf62Q9GZU0 229 aaPredicted RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 SOX17Q9H6I2 414 aaPredicted RBP16.3■□□□□ 0.2
GDE1-203ENST00000564172 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 CHST2Q9Y4C5 530 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 NUP210LQ5VU65 1888 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 IDSB3KWA1 339 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 BRINP1O60477 761 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 SEMA7AO75326 666 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 NCS1P62166 190 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 ANKRD34AQ69YU3 496 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 CFAP77Q6ZQR2 320 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 ZNF605Q86T29 641 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 ZNF721Q8TF20 911 aa16.3■□□□□ 0.2
GDE1-203ENST00000564172 DAZLQ92904 295 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms