RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 ULK3Q6PHR2 472 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 KLHL17Q6TDP4 642 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 MBOAT2Q6ZWT7 520 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 GDF7Q7Z4P5 450 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 P3H2Q8IVL5 708 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 CISD2Q8N5K1 135 aaKnown RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SLC15A4Q8N697 577 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF321PQ8N8H1 164 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 FAM71CQ8NEG0 241 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 NFAM1Q8NET5 270 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 TSPAN14Q8NG11 270 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SLC22A8Q8TCC7 542 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 DNAJA4Q8WW22 397 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF566Q969W8 418 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 EFHD2Q96C19 240 aaPredicted RBP8.91□□□□□ -0.98
UBFD1-203ENST00000564106 NIPSNAP1Q9BPW8 284 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 TBL1XR1Q9BZK7 514 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 IMPAD1Q9NX62 359 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 NDUFA13Q9P0J0 144 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 SLC7A7Q9UM01 511 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 CRYBG3Q68DQ2 2970 aa8.91□□□□□ -0.98
UBFD1-203ENST00000564106 CELSR2Q9HCU4 2923 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 NPIPA5A0A0B4J1W7 369 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TRBV11-1A0A0K0K1C0 115 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CENPVL1A0A0U1RR11 272 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 A1L4Q6 167 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TRIM64A6NGJ6 449 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CLDN24A6NM45 220 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ALG1L2C9J202 215 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 NPIPA7E9PJI5 369 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 E9PQ18 207 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 H3BN98 237 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 GTPBP1O00178 669 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF264O43296 627 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 EIF4E2O60573 245 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TSPAN2O60636 221 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TPST2O60704 377 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 MRPS14O60783 128 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 WISP2O76076 250 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CLIC3O95833 236 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 NPIPA8P0DM63 369 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ICAM2P13598 275 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 MMP11P24347 488 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 FPR3P25089 353 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ABCD3P28288 659 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ST13P50502 369 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CRISP1P54107 249 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 NR1H2P55055 460 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CD47Q08722 323 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 SEC23BQ15437 767 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ALG10BQ5I7T1 473 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 C6orf141Q5SZD1 244 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ZAR1Q86SH2 424 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 RAB43Q86YS6 212 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 DND1Q8IYX4 353 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 SLC43A2Q8N370 569 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CLDN22Q8N7P3 220 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 GALNT11Q8NCW6 608 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 OR11G2Q8NGC1 345 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 OR4C3Q8NH37 302 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TEX47Q8TBZ9 253 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 FBLIM1Q8WUP2 373 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TRUB1Q8WWH5 349 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CNOT9Q92600 299 aaKnown RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 PNPLA2Q96AD5 504 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TMCO6Q96DC7 493 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 OMA1Q96E52 524 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ADOQ96SZ5 270 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 WFDC6Q9BQY6 131 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 FAM192AQ9GZU8 254 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ZNF700Q9H0M5 742 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CCNB1IP1Q9NPC3 277 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CTPS2Q9NRF8 586 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 SCN3BQ9NY72 215 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 ERRFI1Q9UJM3 462 aaPredicted RBP8.9□□□□□ -0.98
UBFD1-203ENST00000564106 TPRKBQ9Y3C4 175 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 MED31Q9Y3C7 131 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 NPFFR2Q9Y5X5 522 aa8.9□□□□□ -0.98
UBFD1-203ENST00000564106 CSMD1Q96PZ7 3565 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 ZGRF1Q86YA3 2104 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 IGHV1-45A0A0A0MS14 117 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 A0A0B4J2E0 115 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 IGHV3-20A0A0C4DH32 117 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 A0A1B0GX12 115 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 ZAR1LA6NP61 321 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 NDUFB5O43674 189 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 PPM1BO75688 479 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 OR6B1O95007 311 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 CLDN1O95832 211 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 ANGPTL1O95841 491 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 LINGO3P0C6S8 592 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 GKN3PP0CG01 181 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 PNMTP11086 282 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 GP1BBP13224 206 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 POU2F1P14859 743 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 CHMP24386 653 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 EEF1B2P24534 225 aaKnown RBP8.89□□□□□ -0.99
UBFD1-203ENST00000564106 HTR2AP28223 471 aa8.89□□□□□ -0.99
UBFD1-203ENST00000564106 RPL5P46777 297 aaKnown RBP8.89□□□□□ -0.99
UBFD1-203ENST00000564106 IDH2P48735 452 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms