RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 FADS1O60427 444 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 NDUFB2O95178 105 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 ADH5P11766 374 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 APEHP13798 732 aaKnown RBP11.76□□□□□ -0.53
COMMD4-209ENST00000564068 NPR2P20594 1047 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 TMEM35AQ53FP2 167 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 NLRC3Q7RTR2 1065 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 ABI3BPQ7Z7G0 1075 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 CD163Q86VB7 1156 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 NOX4Q9NPH5 578 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 BIN3Q9NQY0 253 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 CLEC4EQ9ULY5 219 aa11.76□□□□□ -0.53
COMMD4-209ENST00000564068 PTPRFP10586 1907 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 CHP2O43745 196 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ATP1B1P05026 303 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 TIMP2P16035 220 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PRLHRP49683 370 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 CCR9P51686 369 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SEC13P55735 322 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ITPRIPL2Q3MIP1 535 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 RSPO2Q6UXX9 243 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ABHD13Q7L211 337 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 OR52I2Q8NH67 350 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 BADQ92934 168 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ARL11Q969Q4 196 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ISG20L2Q9H9L3 353 aaKnown RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PLEKHB1Q9UF11 243 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SBF2Q86WG5 1849 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 TRBV5-3A0A0A0MS03 114 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 TEX13DA0A0J9YY54 714 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ANKRD61A6NGH8 418 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 IGLON5A6NGN9 336 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 HMGN4O00479 90 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PLPP1O14494 284 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SOD1P00441 154 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ADRB3P13945 408 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 POU3F3P20264 500 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ACTBP60709 375 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ACTG1P63261 375 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SIRPAP78324 504 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF616Q08AN1 781 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 MPP7Q5T2T1 576 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 VASNQ6EMK4 673 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PRSS42Q7Z5A4 293 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 EID2BQ96D98 161 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 CNTNAP3BQ96NU0 1288 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PLA2G12AQ9BZM1 189 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 EIF5A2Q9GZV4 153 aaKnown RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 HRH4Q9H3N8 390 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 RGCCQ9H4X1 137 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 A4GALTQ9NPC4 353 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SEMA4GQ9NTN9 838 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ACSS1Q9NUB1 689 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 MRTO4Q9UKD2 239 aaKnown RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SLCO2B1O94956 709 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 RAB28P51157 221 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ILF3Q12906 894 aaKnown RBP eCLIP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 MAPK14Q16539 360 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ARHGAP40Q5TG30 622 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 DVL3Q92997 716 aaPredicted RBP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SLC22A18Q96BI1 424 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 DHDHQ9UQ10 334 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 CCL27Q9Y4X3 112 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PHIPQ8WWQ0 1821 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 LATS1O95835 1130 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 CD22P20273 847 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 PTBP1P26599 531 aaKnown RBP eCLIP11.75□□□□□ -0.53
COMMD4-209ENST00000564068 HCCSP53701 268 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 NRG3P56975 720 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 CXADRP78310 365 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 RAB11BQ15907 218 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 C2orf27AQ580R0 203 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 LCTLQ6UWM7 567 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 ORAI1Q96D31 301 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 TNFRSF13CQ96RJ3 184 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 MARVELD1Q9BSK0 173 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 MIXL1Q9H2W2 232 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 SLC6A5Q9Y345 797 aa11.75□□□□□ -0.53
COMMD4-209ENST00000564068 TMEM189-UBE2V1I3L0A0 370 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 YY2O15391 372 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 VEGFDO43915 354 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ACSM4P0C7M7 580 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 OR8G3PP0DMU2 310 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 RAD52P43351 418 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 CTXN1P60606 82 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 DSC1Q08554 894 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 TMEM88Q6PEY1 159 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 LIMS2Q7Z4I7 341 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 SVBPQ8N300 66 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 AUNIPQ9H7T9 357 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 FANCFQ9NPI8 374 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 GPN3Q9UHW5 284 aaPredicted RBP11.74□□□□□ -0.53
COMMD4-209ENST00000564068 WRBO00258 174 aa11.74□□□□□ -0.53
COMMD4-209ENST00000564068 SCGNO76038 276 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms