RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 GADD45GO95257 159 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 NUDT14O95848 222 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 H1F0P07305 194 aaKnown RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 SLC1A3P43003 542 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 DLX5P56178 289 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 GPR85P60893 370 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 DGCR6Q14129 220 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 GANABQ14697 944 aaKnown RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 INPP5JQ15735 1006 aaPredicted RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 ZNF766Q5HY98 468 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 ULK3Q6PHR2 472 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 ZBTB49Q6ZSB9 765 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 GALNTL5Q7Z4T8 443 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 SULF2Q8IWU5 870 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 CADM2Q8N3J6 435 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 GALNT4Q8N4A0 578 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 DNAJA4Q8WW22 397 aaPredicted RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 TMEM234Q8WY98 164 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 ST8SIA1Q92185 356 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 EXTL1Q92935 676 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 SLC41A3Q96GZ6 507 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 EPYCQ99645 322 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 KLHDC3Q9BQ90 382 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 HES7Q9BYE0 225 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 MRPS26Q9BYN8 205 aaKnown RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 C12orf10Q9HB07 376 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 ZFP64Q9NPA5 681 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 KLHL1Q9NR64 748 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 CTPS2Q9NRF8 586 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 ACER3Q9NUN7 267 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 TUBA8Q9NY65 449 aaPredicted RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 TAS2R10Q9NYW0 307 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 RHCGQ9UBD6 479 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 RPS6KB2Q9UBS0 482 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 NTNG1Q9Y2I2 539 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 SAMHD1Q9Y3Z3 626 aaKnown RBP11.73□□□□□ -0.53
SPG7-209ENST00000564047 LYVE1Q9Y5Y7 322 aa11.73□□□□□ -0.53
SPG7-209ENST00000564047 CREBBPQ92793 2442 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 A0A087WZY1 265 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 A0A0G2JMM0 328 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 SMIM31A0A1B0GVY4 71 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 A0A1W2PPB8 328 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 A0A1W2PRS3 328 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 C7orf72A4D263 438 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 LRRC3CA6NJW4 275 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 KIR3DP1A8MWS1 328 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 FAM47E-STBD1D6RA91 191 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 TNFRSF11BO00300 401 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 ETV2O00321 342 aaPredicted RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 CHP2O43745 196 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 GMFGO60234 142 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 LYPD3O95274 346 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 THY1P04216 161 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 GP1BBP13224 206 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 MST1P26927 711 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 DNAJA1P31689 397 aaKnown RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 LIMS1P48059 325 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 ZNF41P51814 821 aaPredicted RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 CDH12P55289 794 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 DSCR4P56555 118 aaPredicted RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 FOXO1Q12778 655 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 TRAM2Q15035 370 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 QPRTQ15274 297 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 TOMM34Q15785 309 aaPredicted RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 SLC25A53Q5H9E4 307 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 ALG10BQ5I7T1 473 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 GDF7Q7Z4P5 450 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 OR4C15Q8NGM1 316 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 C1GALT1C1Q96EU7 318 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 NRBF2Q96F24 287 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 ABHD17AQ96GS6 310 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 MPP4Q96JB8 637 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 JSRP1Q96MG2 331 aaPredicted RBP11.72□□□□□ -0.53
SPG7-209ENST00000564047 GNRHR2Q96P88 292 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 ANKRD60Q9BZ19 345 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 ADAM19Q9H013 955 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 SEMA6AQ9H2E6 1030 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 MAN2C1Q9NTJ4 1040 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 MED17Q9NVC6 651 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 VNN3Q9NY84 501 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 UBAP1Q9NZ09 502 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 SELENONQ9NZV5 590 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 FBXL2Q9UKC9 423 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 CSAG2Q9Y5P2 127 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
SPG7-209ENST00000564047 MED13Q9UHV7 2174 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 PINLYPA6NC86 204 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 CDC40O60508 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPG7-209ENST00000564047 E2F6O75461 281 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 RASAL1O95294 804 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 PDGFAP04085 211 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 SMIM18P0DKX4 95 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 PNMTP11086 282 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 PRKCAP17252 672 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 FPR1P21462 350 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 HTR3AP46098 478 aa11.71□□□□□ -0.53
SPG7-209ENST00000564047 CD97P48960 835 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms