RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 HPS6Q86YV9 775 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC50Q8IVM0 306 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 TTC5Q8N0Z6 440 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 OR2L13Q8N349 312 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 OR10A7Q8NGE5 316 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 OR1L6Q8NGR2 347 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CCDC26Q8TAB7 109 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 VN1R17PQ8TDU5 208 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 PAQR8Q8TEZ7 354 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 FGF11Q92914 225 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CNOT6LQ96LI5 555 aaKnown RBP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 MTMR9Q96QG7 549 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 IL4I1Q96RQ9 567 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 TBX15Q96SF7 602 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CHRDL1Q9BU40 450 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CHIAQ9BZP6 476 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 CAB39LQ9H9S4 337 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 NANSQ9NR45 359 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 EHFQ9NZC4 300 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 PISDQ9UG56 409 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 RIMS3Q9UJD0 308 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 NPIPA1Q9UND3 350 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 SCML2Q9UQR0 700 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 NSD2O96028 1365 aa2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 RPAP1Q9BWH6 1393 aaPredicted RBP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.49□□□□□ -2.01
SHCBP1-202ENST00000563219 FRMPD3Q5JV73 1810 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 A0A087WWV3 80 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 IGHV2-70DA0A0C4DH43 119 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF716A6NP11 495 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 E9PBE3 544 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 SULT2B1O00204 365 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 HAS3O00219 553 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 LATO43561 262 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 RNF13O43567 381 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 OR10H3O60404 316 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 DFNA5O60443 496 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF354AO60765 605 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 RAMP1O60894 148 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 DNAJB6O75190 326 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 KBTBD11O94819 623 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 OXSR1O95747 527 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 AP2A1O95782 977 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 GNA14O95837 355 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 TSPAN12O95859 305 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 GAPDHP04406 335 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 CAPN1P07384 714 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF735P0CB33 412 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 PABPC4LP0CB38 370 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ATP1B2P14415 290 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 MX1P20591 662 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 HTR1FP30939 366 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 CCR1P32246 355 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 GSSP48637 474 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 EFNB2P52799 333 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 SUCLG1P53597 346 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 BIDP55957 195 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ATP5IP56385 69 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 CDK16Q00536 496 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 PAX2Q02962 417 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 RIPPLY1Q0D2K3 151 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 SRSF5Q13243 272 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 MESDQ14696 234 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 TGIF1Q15583 401 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 SFT2D3Q587I9 215 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 BEND3Q5T5X7 828 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 LIPNQ5VXI9 398 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 RNLSQ5VYX0 342 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 TRPM8Q7Z2W7 1104 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 SERPINA9Q86WD7 417 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 CDR2LQ86X02 465 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 GPR65Q8IYL9 337 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 BBS5Q8N3I7 341 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ST8SIA1Q92185 356 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 C12orf42Q96LP6 360 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 PANX2Q96RD6 677 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 CLCC1Q96S66 551 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 RNF2Q99496 336 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 NUP58Q9BVL2 599 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ELOVL4Q9GZR5 314 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 OPN3Q9H1Y3 402 aaPredicted RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 IMPAD1Q9NX62 359 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 BFARQ9NZS9 450 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 WARS2Q9UGM6 360 aaKnown RBP2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 ANGPTL2Q9UKU9 493 aa2.48□□□□□ -2.01
SHCBP1-202ENST00000563219 LOC100131303A0A0U1RQF7 123 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 SMIM28A0A1B0GU29 152 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 A0A1W2PNV4 684 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PP2D1A8MPX8 630 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 TRDCB7Z8K6 153 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 F5H6K3 240 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 HIP1O00291 1037 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC17A2O00624 439 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PFKFB2O60825 505 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 RAMP3O60896 148 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 OR8U8P0C7N1 319 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 ZNF853P0CG23 659 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 SLC2A3P11169 496 aa2.47□□□□□ -2.01
SHCBP1-202ENST00000563219 PGAM2P15259 253 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms