RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 TPST2O60704 377 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 ALOX5P09917 674 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 POLR2EP19388 210 aaKnown RBP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 HNRNPA3P51991 378 aaKnown RBP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 RIPK4P57078 832 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 CCDC14Q49A88 953 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 ATL3Q6DD88 541 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 CCDC137Q6PK04 289 aaKnown RBP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 FAM220AQ7Z4H9 259 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 ERI1Q8IV48 349 aaKnown RBP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 NRMQ8IXM6 262 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 CLEC4FQ8N1N0 589 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 OR2L5Q8NG80 312 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 TRIM44Q96DX7 344 aaPredicted RBP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 TGM7Q96PF1 710 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 POLR1EQ9GZS1 481 aaKnown RBP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 SMYD3Q9H7B4 428 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 AATFQ9NY61 560 aaKnown RBP eCLIP3.84□□□□□ -1.79
LINC00557-201ENST00000563184 ANAPC11Q9NYG5 84 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 CD274Q9NZQ7 290 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 LCMT1Q9UIC8 334 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 MEMO1Q9Y316 297 aa3.84□□□□□ -1.79
LINC00557-201ENST00000563184 FRMPD3Q5JV73 1810 aa3.84□□□□□ -1.8
LINC00557-201ENST00000563184 EMC8O43402 210 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 FGF9P31371 208 aaPredicted RBP3.83□□□□□ -1.8
LINC00557-201ENST00000563184 RBMXP38159 391 aaKnown RBP3.83□□□□□ -1.8
LINC00557-201ENST00000563184 BIDP55957 195 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 CHRNB3Q05901 458 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 TRIM16LQ309B1 348 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 OTPQ5XKR4 325 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 TPGS2Q68CL5 300 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 OR2L13Q8N349 312 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 MTURNQ8N3F0 131 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 TMEM252Q8N6L7 170 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 ALLCQ8N6M5 410 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 OR52I1Q8NGK6 324 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 OR9A1PQ8NGU1 263 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 SETD7Q8WTS6 366 aaKnown RBP3.83□□□□□ -1.8
LINC00557-201ENST00000563184 RLN3Q8WXF3 142 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 CHCHD10Q8WYQ3 142 aaPredicted RBP3.83□□□□□ -1.8
LINC00557-201ENST00000563184 EMG1Q92979 244 aaKnown RBP3.83□□□□□ -1.8
LINC00557-201ENST00000563184 MARC2Q969Z3 335 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 PGLYRP4Q96LB8 373 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 IMMP1LQ96LU5 166 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 CCNL2Q96S94 520 aaPredicted RBP3.83□□□□□ -1.8
LINC00557-201ENST00000563184 MAGT1Q9H0U3 335 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 NUDT15Q9NV35 164 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 DCDC2Q9UHG0 476 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 RPH3ALQ9UNE2 315 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 THSD7BQ9C0I4 1608 aa3.83□□□□□ -1.8
LINC00557-201ENST00000563184 KIF16BQ96L93 1317 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 IGKV6D-41A0A0C4DH26 115 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 METTL21EPA6NDL7 271 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 E7ESA3 106 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 ARPC3O15145 178 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 CXCL13O43927 109 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 MMP23AO75900 390 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 PNMTP11086 282 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 FUT3P21217 361 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 PTGDSP41222 190 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 IFNAR2P48551 515 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 DAP3P51398 398 aaKnown RBP3.82□□□□□ -1.8
LINC00557-201ENST00000563184 PLK1P53350 603 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 CCDC173Q0VFZ6 552 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 IL17AQ16552 155 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 CCDC152Q4G0S7 254 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 EOGTQ5NDL2 527 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 GPRC6AQ5T6X5 926 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 SYT10Q6XYQ8 523 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 ACOT7LQ6ZUV0 252 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 ZNF100Q8IYN0 542 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 ATP6V0D2Q8N8Y2 350 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 FAM133AQ8N9E0 248 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 TRMT10AQ8TBZ6 339 aaKnown RBP3.82□□□□□ -1.8
LINC00557-201ENST00000563184 TCTEX1D2Q8WW35 142 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 OR1E3Q8WZA6 343 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 PIGCQ92535 297 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 MRPS31Q92665 395 aaKnown RBP3.82□□□□□ -1.8
LINC00557-201ENST00000563184 GAL3ST1Q99999 423 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 UFSP2Q9NUQ7 469 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 PHF11Q9UIL8 331 aa3.82□□□□□ -1.8
LINC00557-201ENST00000563184 MRPS7Q9Y2R9 242 aaKnown RBP3.82□□□□□ -1.8
LINC00557-201ENST00000563184 CLSPNQ9HAW4 1339 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 A0A1B0GUS0 222 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 H0YCG3 227 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 PANO1I0J062 215 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 MAGEB3O15480 346 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 HCRTR1O43613 425 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 OR10H3O60404 316 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 SPAG6O75602 509 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 ACTL6AO96019 429 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 PRG2P13727 222 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 YWHABP31946 246 aaKnown RBP3.81□□□□□ -1.8
LINC00557-201ENST00000563184 CAV2P51636 162 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 MAP2K1Q02750 393 aaPredicted RBP3.81□□□□□ -1.8
LINC00557-201ENST00000563184 ATAD3BQ5T9A4 648 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 KRTAP5-4Q6L8H1 288 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 ARCQ7LC44 396 aa3.81□□□□□ -1.8
LINC00557-201ENST00000563184 CCDC71LQ8N9Z2 235 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms