RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 ZNF19P17023 458 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 GJA1P17302 382 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 GABRR2P28476 465 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 CD96P40200 585 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 ZNF85Q03923 595 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 GK2Q14410 553 aaPredicted RBP17.27■□□□□ 0.36
BBS4-204ENST00000562084 EIPR1Q53HC9 387 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 ASTLQ6HA08 431 aaPredicted RBP17.27■□□□□ 0.36
BBS4-204ENST00000562084 LINGO2Q7L985 606 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 HMGN2P46Q86SG4 172 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 SYS1Q8N2H4 156 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 C17orf47Q8NEP4 570 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 CHIAQ9BZP6 476 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 OR10A4Q9H209 315 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 NOX3Q9HBY0 568 aa17.27■□□□□ 0.36
BBS4-204ENST00000562084 CDHR4A6H8M9 788 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 DUXAA6NLW8 204 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ZNF879B4DU55 563 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 CDC42EP2O14613 210 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ARPC1BO15143 372 aaKnown RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 FRS3O43559 492 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 VEGFDO43915 354 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 GMDSO60547 372 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 GABRA1P14867 456 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 MNDAP41218 407 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 DLX5P56178 289 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ACTA2P62736 377 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ACTG2P63267 376 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ILF3Q12906 894 aaKnown RBP eCLIP17.27■□□□□ 0.356e-8■■■■□ 19.9
BBS4-204ENST00000562084 EIF2B5Q13144 721 aaKnown RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 ZNF169Q14929 603 aaPredicted RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 SLC9A5Q14940 896 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 SFRP4Q6FHJ7 346 aaPredicted RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 SLC43A2Q8N370 569 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 HDDC3Q8N4P3 179 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 KCT2Q8NC54 265 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 FCAMRQ8WWV6 532 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 PNPLA2Q96AD5 504 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 QRSL1Q9H0R6 528 aaKnown RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 AUNIPQ9H7T9 357 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 BEX1Q9HBH7 125 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ADGRL4Q9HBW9 690 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 NRIP3Q9NQ35 241 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 IL20RAQ9UHF4 553 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 SLC35A3Q9Y2D2 325 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 PRELID3BQ9Y3B1 194 aa17.27■□□□□ 0.35
BBS4-204ENST00000562084 KLF2Q9Y5W3 355 aaPredicted RBP17.27■□□□□ 0.35
BBS4-204ENST00000562084 ANKRD20A5PA0PJZ0 165 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 RIIAD1A6NNX1 92 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 D6RAR5 112 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 PAPLNO95428 1278 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 THY1P04216 161 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 LPLP06858 475 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 CSNK2A2P19784 350 aaPredicted RBP17.26■□□□□ 0.35
BBS4-204ENST00000562084 SLC25A25Q6KCM7 469 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 TMUB2Q71RG4 321 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 RANBP3LQ86VV4 465 aaPredicted RBP17.26■□□□□ 0.35
BBS4-204ENST00000562084 CMTM4Q8IZR5 234 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 OR4D9Q8NGE8 314 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 LGALS14Q8TCE9 139 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 THEM6Q8WUY1 208 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 KLK6Q92876 244 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 SMIM19Q96E16 107 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 DNTTIP1Q9H147 329 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 SIDT1Q9NXL6 827 aaKnown RBP17.26■□□□□ 0.35
BBS4-204ENST00000562084 ZNF69Q9UC07 566 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 ZNF223Q9UK11 482 aaPredicted RBP17.26■□□□□ 0.35
BBS4-204ENST00000562084 CLEC4AQ9UMR7 237 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 FLVCR2Q9UPI3 526 aa17.26■□□□□ 0.35
BBS4-204ENST00000562084 ZNF443Q9Y2A4 671 aaPredicted RBP17.26■□□□□ 0.35
BBS4-204ENST00000562084 EPOPA6NHQ4 379 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 MPTX1A8MV57 137 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 SLC2A5P22732 501 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 ACVR1BP36896 505 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 UBXN2BQ14CS0 331 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 HEPHL1Q6MZM0 1159 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 PRSS45Q7RTY3 260 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 ADIPOR2Q86V24 386 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 CLRN3Q8NCR9 226 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 NUP43Q8NFH3 380 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 OR5AR1Q8NGP9 310 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 COQ8AQ8NI60 647 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 SPPL3Q8TCT6 385 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 AUTS2Q8WXX7 1259 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 SMPDL3BQ92485 455 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 C16orf58Q96GQ5 468 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 ACTRT3Q9BYD9 372 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 MTHFD2LQ9H903 347 aaPredicted RBP17.25■□□□□ 0.35
BBS4-204ENST00000562084 SLC7A7Q9UM01 511 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 KCNE3Q9Y6H6 103 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
BBS4-204ENST00000562084 UBE2QL1A1L167 161 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 TRAPPC13A5PLN9 417 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 OR1F1O43749 312 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 KHDRBS3O75525 346 aaKnown RBP17.24■□□□□ 0.35
BBS4-204ENST00000562084 NDUFB6O95139 128 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 RAB40ALP0C0E4 278 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 MPIP34949 423 aa17.24■□□□□ 0.35
BBS4-204ENST00000562084 RAD52P43351 418 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms