RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 CALUO43852 315 aaPredicted RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 TNFSF15O95150 251 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 FCER2P06734 321 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 PAEPP09466 180 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 ALPIP09923 528 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 GIMD1P0DJR0 217 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 ETS1P14921 441 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 PPP2R1BP30154 601 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 DRD3P35462 400 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 CSKP41240 450 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 MAGEA4P43358 317 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 RPL34P49207 117 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 PGFP49763 221 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 TKTL1P51854 596 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 LIMK2P53671 638 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 RIPPLY3P57055 190 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 RPL27P61353 136 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 IL9RQ01113 521 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 MS4A2Q01362 244 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 ZFP36L1Q07352 338 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 BST2Q10589 180 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 LY6DQ14210 128 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 HAGHQ16775 308 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 KRTAP21-3Q3LHN1 58 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 MS4A13Q5J8X5 152 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 RABGAP1LQ5R372 815 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 FAM182AQ5T1J6 154 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 DCAF12Q5T6F0 453 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 NEPROQ6NW34 567 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 MARCH9Q86YJ5 346 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 HPS6Q86YV9 775 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 MMAAQ8IVH4 418 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 LINC00518Q8N0U6 118 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 SLC34A3Q8N130 599 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 LRRC17Q8N6Y2 441 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 Q8NBF4 154 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 CCDC112Q8NEF3 446 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 OR52E1Q8NGJ3 308 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 MRPL53Q96EL3 112 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 C14orf79Q96F83 325 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 BTN2A3PQ96KV6 586 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 PRICKLE1Q96MT3 831 aaPredicted RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 SERPINB11Q96P15 392 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 COQ7Q99807 217 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 CHCHD5Q9BSY4 110 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 LRRC61Q9BV99 259 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 RBM24Q9BX46 236 aaKnown RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 TRIM15Q9C019 465 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 RAB17Q9H0T7 212 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 TMEM231Q9H6L2 316 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 DYRK4Q9NR20 520 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 FAM212BQ9NTI7 297 aaPredicted RBP3.07□□□□□ -1.92
HERC1-215ENST00000561436 CIDEBQ9UHD4 219 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 BCAP29Q9UHQ4 241 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 SMC3Q9UQE7 1217 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 HS3ST2Q9Y278 367 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 PATJQ8NI35 1801 aa3.07□□□□□ -1.92
HERC1-215ENST00000561436 IGLV4-3A0A075B6K6 122 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 TRGV8A0A0C4DH27 118 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 LOC390937A0A1W2PQ73 354 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 IGLON5A6NGN9 336 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 LRRIQ3A6PVS8 624 aaPredicted RBP3.06□□□□□ -1.92
HERC1-215ENST00000561436 ZNF749O43361 778 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 BUB1O43683 1085 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 TSPAN2O60636 221 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 TBL1XO60907 577 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 CLDN11O75508 207 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 B3GALNT1O75752 331 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 YEATS4O95619 227 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 POP4O95707 220 aaKnown RBP3.06□□□□□ -1.92
HERC1-215ENST00000561436 HPRP00739 348 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 IL1BP01584 269 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 APOEP02649 317 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 FHP07954 510 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 HOXC4P09017 264 aaPredicted RBP3.06□□□□□ -1.92
HERC1-215ENST00000561436 KRT13P13646 458 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 CCDC130P13994 396 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 ZNF10P21506 573 aaPredicted RBP3.06□□□□□ -1.92
HERC1-215ENST00000561436 ADORA2BP29275 332 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 CD70P32970 193 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 ID1P41134 155 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 CCL11P51671 97 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 DAOAP59103 153 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 PFN3P60673 137 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 NUCB2P80303 420 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 MYBPC1Q00872 1141 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 IL1RL1Q01638 556 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 RIGQ13278 110 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 MSLNQ13421 630 aaPredicted RBP3.06□□□□□ -1.92
HERC1-215ENST00000561436 NFATC2Q13469 925 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 SNX1Q13596 522 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 SLC17A1Q14916 467 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 ZNF146Q15072 292 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 ELOCQ15369 112 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 DOPEY1Q5JWR5 2465 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 TEX35Q5T0J7 233 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 LIPJQ5W064 366 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 ZFYVE26Q68DK2 2539 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 OR6B2Q6IFH4 312 aa3.06□□□□□ -1.92
HERC1-215ENST00000561436 DOK6Q6PKX4 331 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms