RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 RPS6KB2Q9UBS0 482 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 ANGPT4Q9Y264 503 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 IFT52Q9Y366 437 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 EMC9Q9Y3B6 208 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 SPIN1Q9Y657 262 aaPredicted RBP9.08□□□□□ -0.96
HERC1-212ENST00000561348 CENPEQ02224 2701 aa9.08□□□□□ -0.96
HERC1-212ENST00000561348 PKDREJQ9NTG1 2253 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 HCFC1P51610 2035 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 TMED7-TICAM2A0A0A6YYA0 188 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 C7orf72A4D263 438 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 GMNCA6NCL1 334 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 FBP2O00757 339 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 AIM2O14862 343 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 CCDC22O60826 627 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ADAM11O75078 769 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 OPN1SWP03999 348 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 PABPC4LP0CB38 370 aaKnown RBP9.07□□□□□ -0.96
HERC1-212ENST00000561348 ARAFP10398 606 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 FCGR2AP12318 317 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 PRG2P13727 222 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 PRF1P14222 555 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ELK4P28324 431 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ADH6P28332 368 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 LSP1P33241 339 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 APOBEC1P41238 236 aaKnown RBP9.07□□□□□ -0.96
HERC1-212ENST00000561348 KIR2DL3P43628 341 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 OR2B6P58173 313 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 NCALDP61601 193 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 TLE4Q04727 773 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 BNIP2Q12982 314 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 RABL3Q5HYI8 236 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 TMEM201Q5SNT2 666 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 GTF2IRD2BQ6EKJ0 949 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ZNF550Q7Z398 422 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 GRINAQ7Z429 371 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 GDF7Q7Z4P5 450 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 BTLAQ7Z6A9 289 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 SERPINA11Q86U17 422 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 MTDHQ86UE4 582 aaKnown RBP9.07□□□□□ -0.96
HERC1-212ENST00000561348 GTF2IRD2Q86UP8 949 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 CMIPQ8IY22 773 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 SMYD1Q8NB12 490 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 PCYOX1LQ8NBM8 494 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 C11orf65Q8NCR3 313 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 LINC01560Q8TB33 94 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ABHD3Q8WU67 409 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 STON2Q8WXE9 905 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 RNASE6Q93091 150 aaKnown RBP9.07□□□□□ -0.96
HERC1-212ENST00000561348 RCN3Q96D15 328 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ZFP3Q96NJ6 502 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ZNF607Q96SK3 696 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 SPATA5L1Q9BVQ7 753 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 KLHL4Q9C0H6 718 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 PAQR5Q9NXK6 330 aaPredicted RBP9.07□□□□□ -0.96
HERC1-212ENST00000561348 PACSIN3Q9UKS6 424 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 PROCRQ9UNN8 238 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 TMED7Q9Y3B3 224 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 ZNF175Q9Y473 711 aa9.07□□□□□ -0.96
HERC1-212ENST00000561348 CDHR4A6H8M9 788 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 TUBAL3A6NHL2 446 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ADAMDEC1O15204 470 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 SERPINB7O75635 380 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 NTN1O95631 604 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 GUSBP08236 651 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 HOXB9P17482 250 aaPredicted RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 GPX2P18283 190 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 PTNP21246 168 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 RPS4Y1P22090 263 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 ENPP1P22413 925 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 DIO1P49895 249 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 POLR2HP52434 150 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 DLX5P56178 289 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 EEF1A1P68104 462 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 PLAURQ03405 335 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 TFF3Q07654 80 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 EPS8Q12929 822 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 CTU2Q2VPK5 515 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 TRMT5Q32P41 509 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 GLIPR1L2Q4G1C9 344 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 SYT14P1Q58G82 188 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ANKRD34AQ69YU3 496 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 FCRLAQ7L513 359 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 FAM214BQ7L5A3 538 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 ADGRE4PQ86SQ3 457 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 KIF18BQ86Y91 864 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ARMC8Q8IUR7 673 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ZNF440Q8IYI8 595 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 DPP10Q8N608 796 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ZNF610Q8N9Z0 462 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 HIPK4Q8NE63 616 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 FAM71CQ8NEG0 241 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 VANGL1Q8TAA9 524 aaPredicted RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 TSPEARQ8WU66 669 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 CPNE4Q96A23 557 aaPredicted RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 LRRC58Q96CX6 371 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 STARD4Q96DR4 205 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 ZC3HAV1LQ96H79 300 aaKnown RBP9.06□□□□□ -0.96
HERC1-212ENST00000561348 ARL5BQ96KC2 179 aa9.06□□□□□ -0.96
HERC1-212ENST00000561348 UCN2Q96RP3 112 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms