RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ALKBH6Q3KRA9 238 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 HIKESHIQ53FT3 197 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 UNC50Q53HI1 259 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 AGBL2Q5U5Z8 902 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 SLX4IPQ5VYV7 408 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 PLCXD3Q63HM9 321 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ACSM5Q6NUN0 579 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 TMEM53Q6P2H8 277 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 TMEM220Q6QAJ8 160 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 CYS1Q717R9 158 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 APTXQ7Z2E3 356 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 SLC25A42Q86VD7 318 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 KCNMB4Q86W47 210 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 CLEC4FQ8N1N0 589 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 DHRSXQ8N5I4 330 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 C15orf54Q8N8G6 183 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ZSCAN4Q8NAM6 433 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 OR13F1Q8NGS4 319 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 OR9A1PQ8NGU1 263 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 MAIP1Q8WWC4 291 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 EFHD2Q96C19 240 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 CNRIP1Q96F85 164 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 ZNF414Q96IQ9 312 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 FAM218AQ96MZ4 157 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 NIPSNAP3BQ9BS92 247 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 CHCHD5Q9BSY4 110 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 TMEM121Q9BTD3 319 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 C20orf24Q9BUV8 137 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ST6GALNAC5Q9BVH7 336 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 NXF5Q9H1B4 397 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 PARLQ9H300 379 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 CHMP4BQ9H444 224 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 RGCCQ9H4X1 137 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 AZI2Q9H6S1 392 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 SMYD3Q9H7B4 428 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 PLEKHA3Q9HB20 300 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 CYP3A43Q9HB55 503 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 MRPS30Q9NP92 439 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 NT5MQ9NPB1 228 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 IL36GQ9NZH8 169 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 RCOR3Q9P2K3 495 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 PSMC3IPQ9P2W1 217 aaPredicted RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 EIF3KQ9UBQ5 218 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 VANGL2Q9ULK5 521 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 MRPS18CQ9Y3D5 142 aaKnown RBP2.93□□□□□ -1.94
SPG11-218ENST00000559754 ALG6Q9Y672 507 aa2.93□□□□□ -1.94
SPG11-218ENST00000559754 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 A0A0J9YYE9 177 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 CCDC182A6NF36 153 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 GABRR3A8MPY1 467 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 RNF212BA8MTL3 300 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 F5H6K3 240 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 NVLO15381 856 aaKnown RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 EFNA2O43921 213 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 DUSP11O75319 330 aaKnown RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 SNAI1O95863 264 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 F10P00742 488 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 CA1P00915 261 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 CSTAP01040 98 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 NPPAP01160 153 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 JCHAINP01591 159 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 TRBC1P01850 177 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 IGHG4P01861 327 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 GCFC2P16383 781 aaKnown RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 SRMP19623 302 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 ATP5A1P25705 553 aaKnown RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 U2AF2P26368 475 aaKnown RBP eCLIP2.92□□□□□ -1.946e-8■■■■□ 24.3
SPG11-218ENST00000559754 FCGR2CP31995 323 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 LONP1P36776 959 aaKnown RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 STARP49675 285 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 DHODHQ02127 395 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 LIPEQ05469 1076 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 KLRC3Q07444 240 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 KLRB1Q12918 225 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 ZNF177Q13360 481 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 FAM189A2Q15884 450 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 PPP1R3AQ16821 1122 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 SLC5A12Q1EHB4 618 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 SLC25A52Q3SY17 297 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 SBK1Q52WX2 424 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 C1orf220Q5T0J3 134 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 FAHD2BQ6P2I3 314 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 STAC2Q6ZMT1 411 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 STOX1Q6ZVD7 989 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 CEACAM19Q7Z692 300 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 VTCN1Q7Z7D3 282 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 MFSD6LQ8IWD5 586 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 OR10G7Q8NGN6 311 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 CNIH3Q8TBE1 160 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 GPX8Q8TED1 209 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 MITD1Q8WV92 249 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 PCNPQ8WW12 178 aaKnown RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 BIRC7Q96CA5 298 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 NUS1Q96E22 293 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 FAHD2AQ96GK7 314 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 ZNF578Q96N58 590 aaPredicted RBP2.92□□□□□ -1.94
SPG11-218ENST00000559754 TECTBQ96PL2 329 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 IL4I1Q96RQ9 567 aa2.92□□□□□ -1.94
SPG11-218ENST00000559754 ATF6BQ99941 703 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms