RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 C16orf97H3BN30 126 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 DNAJA2O60884 412 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 ADAM11O75078 769 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 PRKD3O94806 890 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 NUDT7P0C024 238 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 NID1P14543 1247 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 KLK2P20151 261 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 RPS4Y1P22090 263 aaKnown RBP13.65□□□□□ -0.22
RPL28-207ENST00000558815 SQLEQ14534 574 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 RNPS1Q15287 305 aaKnown RBP13.65□□□□□ -0.22
RPL28-207ENST00000558815 MAPK11Q15759 364 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 SYT14P1Q58G82 188 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 BLOC1S3Q6QNY0 202 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 ZNF836Q6ZNA1 936 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 NUFIP2Q7Z417 695 aaKnown RBP13.65□□□□□ -0.22
RPL28-207ENST00000558815 GRINAQ7Z429 371 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 TUSC5Q8IXB3 177 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 SLC38A5Q8WUX1 472 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 PLSCR4Q9NRQ2 329 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 RLIMQ9NVW2 624 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 PLEKHA6Q9Y2H5 1048 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 SPIN1Q9Y657 262 aaPredicted RBP13.65□□□□□ -0.22
RPL28-207ENST00000558815 ANKHD1Q8IWZ3 2542 aaKnown RBP13.65□□□□□ -0.22
RPL28-207ENST00000558815 AKAP9Q99996 3911 aa13.65□□□□□ -0.22
RPL28-207ENST00000558815 A0A096LPI6 279 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 SULT2B1O00204 365 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 ETV2O00321 342 aaPredicted RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 FESP07332 822 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 TFPTP0C1Z6 253 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 GKN3PP0CG01 181 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 CD1EP15812 388 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 APOBEC1P41238 236 aaKnown RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 MAGEA8P43361 318 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 MRPL19P49406 292 aaKnown RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 DIO1P49895 249 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 ART1P52961 327 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 IST1P53990 364 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 RAC3P60763 192 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 SF3A3Q12874 501 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■□□□ 13.6
RPL28-207ENST00000558815 RGNQ15493 299 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 LIN52Q52LA3 116 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 PAGE3Q5JUK9 113 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 CMIPQ8IY22 773 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 SLC25A43Q8WUT9 341 aaPredicted RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 MAL2Q969L2 176 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 CCM2LQ9NUG4 571 aaPredicted RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 SLAMF8Q9P0V8 285 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 KLHL13Q9P2N7 655 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 ST6GALNAC2Q9UJ37 374 aa13.64□□□□□ -0.23
RPL28-207ENST00000558815 ZNF443Q9Y2A4 671 aaPredicted RBP13.64□□□□□ -0.23
RPL28-207ENST00000558815 OTOGQ6ZRI0 2925 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 TMED7-TICAM2A0A0A6YYA0 188 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 A0A0G2JND7 137 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 CFAP73A6NFT4 308 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 HRGP04196 525 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 UQCRBP14927 111 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 ATP4BP51164 291 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 CSNK2A1P68400 391 aaPredicted RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 RASGEF1BQ0VAM2 473 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 AP1ARQ63HQ0 302 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 ALKBH2Q6NS38 261 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 BEND4Q6ZU67 534 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 MSRB3Q8IXL7 192 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 SLC43A2Q8N370 569 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 CADM2Q8N3J6 435 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 PIK3IP1Q96FE7 263 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 ZNF300Q96RE9 604 aaPredicted RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 ZNF226Q9NYT6 803 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 SLC25A37Q9NYZ2 338 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 KLHL9Q9P2J3 617 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 TMED7Q9Y3B3 224 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 HRNRQ86YZ3 2850 aaPredicted RBP13.63□□□□□ -0.23
RPL28-207ENST00000558815 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
RPL28-207ENST00000558815 A0A0G2JPF8 293 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 HNRNPCL2B2RXH8 293 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 HNRNPCL3B7ZW38 293 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 HNRNPCL1O60812 293 aaKnown RBP13.62□□□□□ -0.23
RPL28-207ENST00000558815 HNRNPCL4P0DMR1 293 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 HOXB9P17482 250 aaPredicted RBP13.62□□□□□ -0.23
RPL28-207ENST00000558815 DNASE1P24855 282 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 TACR3P29371 465 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 POLR2HP52434 150 aaKnown RBP13.62□□□□□ -0.23
RPL28-207ENST00000558815 OR2B6P58173 313 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 EPS8Q12929 822 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 FADDQ13158 208 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 LARS2Q15031 903 aaKnown RBP13.62□□□□□ -0.23
RPL28-207ENST00000558815 TSC22D1Q15714 1073 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 TFAP2EQ6VUC0 442 aa13.62□□□□□ -0.23
RPL28-207ENST00000558815 TMPPEQ6ZT21 453 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms