RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 CNTN2Q02246 1040 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 RAB40BQ12829 278 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ODF3L2Q3SX64 289 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 BOLA3Q53S33 107 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 LCE1EQ5T753 118 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ATF7IP2Q5U623 682 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 LIPNQ5VXI9 398 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCBE1Q6UXH8 406 aaPredicted RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 STAC2Q6ZMT1 411 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 TRIM69Q86WT6 500 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF100Q8IYN0 542 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 COMMD1Q8N668 190 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR7G2Q8NG99 324 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 OR9K2Q8NGE7 335 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM122AQ96E09 287 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 PIWIL1Q96J94 861 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 NODALQ96S42 347 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM192AQ9GZU8 254 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZDHHC11Q9H8X9 412 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 WRAP73Q9P2S5 460 aaPredicted RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF221Q9UK13 617 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF346Q9UL40 294 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 RABL2BQ9UNT1 228 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 LRP12Q9Y561 859 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 FLVCR1Q9Y5Y0 555 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CPSF1Q10570 1443 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ITSN1Q15811 1721 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 IGHV3OR16-10A0A075B7F0 116 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 SNTNA6NMZ2 147 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 AP3B1O00203 1094 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 SNNO75324 88 aaPredicted RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF432O94892 652 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 POP4O95707 220 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 RETP07949 1114 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ALPIP09923 528 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 TOP1P11387 765 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 PGAM2P15259 253 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 DPEP1P16444 411 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 PRDX6P30041 224 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 DUTP33316 252 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 DLSTP36957 453 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 MAP3K8P41279 467 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 SYKP43405 635 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 SUCLG1P53597 346 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 AIF1P55008 147 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 NANOS2P60321 138 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ADARB1P78563 741 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 FGL1Q08830 312 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCDC173Q0VFZ6 552 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CALCOCO2Q13137 446 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CRMP1Q14194 572 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 KLHL40Q2TBA0 621 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 SFT2D3Q587I9 215 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 C6orf226Q5I0X4 101 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CEP85LQ5SZL2 805 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 OTUD3Q5T2D3 398 aaPredicted RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 KRTAP5-1Q6L8H4 278 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 FAM53AQ6NSI3 398 aaPredicted RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 GSG1LQ6UXU4 331 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ARCQ7LC44 396 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 MICU2Q8IYU8 434 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 IPMKQ8NFU5 416 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 BRSK1Q8TDC3 778 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CRYGNQ8WXF5 182 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 STARD8Q92502 1023 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZBTB9Q96C00 473 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 MOCOSQ96EN8 888 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 AMDHD1Q96NU7 426 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 NPAS2Q99743 824 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 TMEM43Q9BTV4 400 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZSCAN5AQ9BUG6 496 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 PUS3Q9BZE2 481 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 LINC00597Q9H2U6 94 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ACTR8Q9H981 624 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 LZTFL1Q9NQ48 299 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 CUTCQ9NTM9 273 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 UTP6Q9NYH9 597 aaKnown RBP1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 NUDT4Q9NZJ9 180 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF580Q9UK33 172 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 ABCG2Q9UNQ0 655 aa1.12□□□□□ -2.23
CTDSPL2-202ENST00000558373 IBTKQ9P2D0 1353 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 AKNAQ7Z591 1439 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 IGHV7-81A0A0B4J1V7 117 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 PP2D1A8MPX8 630 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ARHGEF33A8MVX0 844 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 TCP11X1B4DZS4 312 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 C9JVG2 144 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ABCD4O14678 606 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CASKO14936 926 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 B4GAT1O43505 415 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 RANBP6O60518 1105 aaKnown RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 NME6O75414 186 aaPredicted RBP1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 B3GAT3O94766 335 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 JCHAINP01591 159 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 IGHG3P01860 377 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CD55P08174 381 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 ZNF24P17028 368 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 HMOX2P30519 316 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 CCR1P32246 355 aa1.11□□□□□ -2.23
CTDSPL2-202ENST00000558373 YAP1P46937 504 aaKnown RBP1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms