RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 CNOT2Q9NZN8 540 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 CCDC59Q9P031 241 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 NTMQ9P121 344 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 NPIPA1Q9UND3 350 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 YARS2Q9Y2Z4 477 aaKnown RBP9.43□□□□□ -0.9
TPM1-212ENST00000558347 ENPP4Q9Y6X5 453 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 PMF1-BGLAPU3KQ54 211 aa9.43□□□□□ -0.9
TPM1-212ENST00000558347 A0A1W2PS29 197 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 EFCAB10A6NFE3 127 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 HRKO00198 91 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 WWP2O00308 870 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 EMC8O43402 210 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ZNF354AO60765 605 aaPredicted RBP9.42□□□□□ -0.9
TPM1-212ENST00000558347 SLC19A2O60779 497 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 SERPINB7O75635 380 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 BMP4P12644 408 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ETFAP13804 333 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ZNF24P17028 368 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 GABRB1P18505 474 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 RHCEP18577 417 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 NR4A1P22736 598 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 GALNSP34059 522 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 GPC1P35052 558 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 SOAT1P35610 550 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 CHI3L1P36222 383 aaPredicted RBP9.42□□□□□ -0.9
TPM1-212ENST00000558347 RFC3P40938 356 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 CA7P43166 264 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 CCT3P49368 545 aaKnown RBP9.42□□□□□ -0.9
TPM1-212ENST00000558347 MEOX1P50221 254 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 PPP5CP53041 499 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 GPR85P60893 370 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 RNF4P78317 190 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 HSF1Q00613 529 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 RBPJQ06330 500 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.42□□□□□ -0.9
TPM1-212ENST00000558347 C3AR1Q16581 482 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ZNF750Q32MQ0 723 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 KRTCAP3Q53RY4 240 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 COX20Q5RI15 118 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 BHLHB9Q6PI77 547 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 HSDL2Q6YN16 418 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ZNF367Q7RTV3 350 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 SLC46A3Q7Z3Q1 461 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 KBTBD8Q8NFY9 601 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 OR56A1Q8NGH5 318 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 NFKBIDQ8NI38 313 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 DOK4Q8TEW6 326 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ZNF721Q8TF20 911 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 MAL2Q969L2 176 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ELP4Q96EB1 424 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 CCDC120Q96HB5 630 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 RASL10BQ96S79 203 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 NEURL2Q9BR09 285 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 PELOQ9BRX2 385 aaKnown RBP9.42□□□□□ -0.9
TPM1-212ENST00000558347 RACGAP1Q9H0H5 632 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 C3orf14Q9HBI5 128 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 RASSF1Q9NS23 344 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 DEPPQ9NTK1 212 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 SELENONQ9NZV5 590 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 MYOTQ9UBF9 498 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 TINAGQ9UJW2 476 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 KLF13Q9Y2Y9 288 aaPredicted RBP9.42□□□□□ -0.9
TPM1-212ENST00000558347 FAM32AQ9Y421 112 aaKnown RBP9.42□□□□□ -0.9
TPM1-212ENST00000558347 TESMINQ9Y4I5 508 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 UGT2A1Q9Y4X1 527 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 ITPR2Q14571 2701 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 CSMD1Q96PZ7 3565 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 MYO7BQ6PIF6 2116 aa9.42□□□□□ -0.9
TPM1-212ENST00000558347 A0A087WV62 115 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 METTL15A6NJ78 407 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 M0R082 166 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CCL21O00585 134 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ASNA1O43681 348 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 AIREO43918 545 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PDE9AO76083 593 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CCNB2O95067 398 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 IGKV3-11P04433 115 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 LCKP06239 509 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PIPP12273 146 aaPredicted RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 CBLP22681 906 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SOX3P41225 446 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 CLK1P49759 484 aaKnown RBP9.41□□□□□ -0.9
TPM1-212ENST00000558347 PSMD7P51665 324 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 DSTNP60981 165 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 NCS1P62166 190 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 PRR5P85299 388 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 MAP4K2Q12851 820 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 DGCR6Q14129 220 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 TIGD6Q17RP2 521 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 EXOC3L2Q2M3D2 409 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZNF404Q494X3 552 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 SPDYE7PQ495Y7 208 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 ZNF628Q5EBL2 1059 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 IL20RBQ6UXL0 311 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 C6orf120Q7Z4R8 191 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 C9orf40Q8IXQ3 194 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 OR2L13Q8N349 312 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 OR9A2Q8NGT5 310 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 OR8K3Q8NH51 312 aa9.41□□□□□ -0.9
TPM1-212ENST00000558347 OR5AK3PQ8NH89 298 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms