RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 OCC1Q8TAD7 63 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 SLC13A3Q8WWT9 602 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 BCL2L2Q92843 193 aaPredicted RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 ECHDC3Q96DC8 303 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 HSFY1Q96LI6 401 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 TNFRSF13CQ96RJ3 184 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 GAL3ST4Q96RP7 486 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 LITAFQ99732 161 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 FNDC11Q9BVV2 318 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 VN1R1Q9GZP7 353 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 SLC26A1Q9H2B4 701 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 ANKZF1Q9H8Y5 726 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 CNOT10Q9H9A5 744 aaKnown RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 HRASLS2Q9NWW9 162 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 DDIT4Q9NX09 232 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 VPS18Q9P253 973 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 LHX3Q9UBR4 397 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 LAMP5Q9UJQ1 280 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 CHKBQ9Y259 395 aa4.94□□□□□ -1.62
RTF1-204ENST00000558117 EIF3LQ9Y262 564 aaKnown RBP4.94□□□□□ -1.62
RTF1-204ENST00000558117 ZNF407Q9C0G0 2248 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 NSG1A0A0A6YYJ2 146 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 A0A1W2PQ72 361 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 FEZF1A0PJY2 475 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 SYCE3A1L190 88 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 VSTM2BA6NLU5 285 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 E9PI62 339 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 SLCO1B7G3V0H7 640 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 H3BQV1 296 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 CDC40O60508 579 aaKnown RBP eCLIP4.93□□□□□ -1.62
RTF1-204ENST00000558117 SNX4O95219 450 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 IFNB1P01574 187 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 UQCRHP07919 91 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 FRMD6-AS1P0C7T7 363 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 CCDC166P0CW27 439 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 CYLC1P35663 651 aaPredicted RBP4.93□□□□□ -1.62
RTF1-204ENST00000558117 ACVR1BP36896 505 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 NSG1P42857 185 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 RPL34P49207 117 aaKnown RBP4.93□□□□□ -1.62
RTF1-204ENST00000558117 CDH13P55290 713 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 RHOAP61586 193 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 KCNJ10P78508 379 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 IHHQ14623 411 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 C1orf220Q5T0J3 134 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 FAM91A1Q658Y4 838 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 CYB5R2Q6BCY4 276 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 ETFRF1Q6IPR1 90 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 SLC25A25Q6KCM7 469 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 LCLAT1Q6UWP7 414 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 OR5M9Q8NGP3 310 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 PSMA8Q8TAA3 256 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 RNF128Q8TEB7 428 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 EEF2KMTQ96G04 330 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 SGK494Q96LW2 274 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 SIX2Q9NPC8 291 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 MED29Q9NX70 200 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 C6orf203Q9P0P8 240 aaPredicted RBP4.93□□□□□ -1.62
RTF1-204ENST00000558117 COX16Q9P0S2 106 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 RABL2AQ9UBK7 228 aaPredicted RBP4.93□□□□□ -1.62
RTF1-204ENST00000558117 MTRF1LQ9UGC7 380 aaKnown RBP4.93□□□□□ -1.62
RTF1-204ENST00000558117 SLC23A2Q9UGH3 650 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 AURKCQ9UQB9 309 aa4.93□□□□□ -1.62
RTF1-204ENST00000558117 A0A1W2PRB8 838 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 HYKKA2RU49 373 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 C2orf81A6NN90 581 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 PRR32B1ATL7 298 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 NPIPA2E9PIF3 369 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 NPIPA3F8WFD2 350 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 TFECO14948 347 aaPredicted RBP4.92□□□□□ -1.62
RTF1-204ENST00000558117 HCRTR1O43613 425 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 OR10H2O60403 315 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 PEX11AO75192 247 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 NGFP01138 241 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 IGHV4-31P0DP07 118 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 LHCGRP22888 699 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 KCNJ1P48048 391 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 CAMLGP49069 296 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 VSX2P58304 361 aaPredicted RBP4.92□□□□□ -1.62
RTF1-204ENST00000558117 GMFBP60983 142 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 GNB1P62873 340 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 LGALS3BPQ08380 585 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 CYTH1Q15438 398 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 SLC5A12Q1EHB4 618 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 KIAA1644Q3SXP7 199 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 WASH2PQ6VEQ5 465 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 CDHR3Q6ZTQ4 885 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 SPATA21Q7Z572 469 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 TIGD4Q8IY51 512 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 LPCAT1Q8NF37 534 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 OR1J1Q8NGS3 322 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 HSD17B8Q92506 261 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 CXorf40BQ96DE9 158 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 PIGQQ9BRB3 760 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 TRIM62Q9BVG3 475 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 ANGPTL4Q9BY76 406 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 NOL11Q9H8H0 719 aaKnown RBP4.92□□□□□ -1.62
RTF1-204ENST00000558117 EML4Q9HC35 981 aaKnown RBP4.92□□□□□ -1.62
RTF1-204ENST00000558117 A4GALTQ9NPC4 353 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 POLE3Q9NRF9 147 aa4.92□□□□□ -1.62
RTF1-204ENST00000558117 CTSFQ9UBX1 484 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms