RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ZNF845Q96IR2 970 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 ADGRG7Q96K78 797 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 SPATA5L1Q9BVQ7 753 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 SPATA9Q9BWV2 254 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 PIGMQ9H3S5 423 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 TMEM185BQ9H7F4 350 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 RNF122Q9H9V4 155 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 DNAJB12Q9NXW2 375 aaKnown RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF443Q9Y2A4 671 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 SPIN1Q9Y657 262 aaPredicted RBP11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CAPN7Q9Y6W3 813 aa11.22□□□□□ -0.61
SLIRP-211ENST00000557623 CDHR4A6H8M9 788 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 CFAP73A6NFT4 308 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 SYT5O00445 386 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 EFNA2O43921 213 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 CXCL13O43927 109 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 BCAS1O75363 584 aaPredicted RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 OPN1LWP04000 364 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 PABPC4LP0CB38 370 aaKnown RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 IL11P20809 199 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 SLC7A1P30825 629 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 IDH2P48735 452 aaKnown RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 CARD18P57730 90 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 RBBP4Q09028 425 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 FOXF2Q12947 444 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 SCARB2Q14108 478 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 TRMT5Q32P41 509 aaKnown RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 TMEM176BQ3YBM2 270 aaPredicted RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF311Q5JNZ3 666 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 GTF2IRD2BQ6EKJ0 949 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 PPP4R4Q6NUP7 873 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 PLXDC2Q6UX71 529 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 MEX3BQ6ZN04 569 aaKnown RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF836Q6ZNA1 936 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 GTF2IRD2Q86UP8 949 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 PCYOX1LQ8NBM8 494 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 ACBD4Q8NC06 268 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 HIPK4Q8NE63 616 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 NFKBIDQ8NI38 313 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 FNDC9Q8TBE3 224 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 OSTF1Q92882 214 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 RNASE6Q93091 150 aaKnown RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 REXO5Q96IC2 774 aaKnown RBP11.21□□□□□ -0.61
SLIRP-211ENST00000557623 ZNF607Q96SK3 696 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 SH3GL1Q99961 368 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 IKZF5Q9H5V7 419 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 GLRX2Q9NS18 164 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 ANGPT4Q9Y264 503 aa11.21□□□□□ -0.61
SLIRP-211ENST00000557623 HECTD1Q9ULT8 2610 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 A0A1W2PNV4 684 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 EEF1E1-BLOC1S5C9J1V9 151 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 FBP2O00757 339 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 EEF1E1O43324 174 aaKnown RBP11.2□□□□□ -0.62
SLIRP-211ENST00000557623 IGFBP2P18065 325 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 LSP1P33241 339 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 MAP2K6P52564 334 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 AGFG1P52594 562 aaKnown RBP11.2□□□□□ -0.62
SLIRP-211ENST00000557623 MTPNP58546 118 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 COPZ1P61923 177 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 PLAURQ03405 335 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 EPS8Q12929 822 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 CYP51A1Q16850 503 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 REP15Q6BDI9 236 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 SPATA21Q7Z572 469 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 SLC30A8Q8IWU4 369 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 DMRTC2Q8IXT2 367 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-211ENST00000557623 GCNT2Q8N0V5 402 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 CNEP1R1Q8N9A8 125 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 C11orf65Q8NCR3 313 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 ATP6V1C2Q8NEY4 427 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 BHLHE22Q8NFJ8 381 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-211ENST00000557623 SLC35B4Q969S0 331 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 ZNF524Q96C55 264 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 ELAC2Q9BQ52 826 aaKnown RBP11.2□□□□□ -0.62
SLIRP-211ENST00000557623 CCDC106Q9BWC9 280 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 GID8Q9NWU2 228 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 JKAMPQ9P055 326 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 CHRNA9Q9UGM1 479 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 PACSIN3Q9UKS6 424 aa11.2□□□□□ -0.62
SLIRP-211ENST00000557623 CACNA1DQ01668 2161 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 LOC100653049A0A140TA62 436 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 PRORSD1PA6NEY8 169 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 AP3D1O14617 1153 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 MRASO14807 208 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 SERPINB7O75635 380 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 TNFSF13O75888 250 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 KRT34O76011 436 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 PLGP00747 810 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 SHC1P29353 583 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 PRKAR1BP31321 381 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 UQCRC1P31930 480 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 SLC1A3P43003 542 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 CLK1P49759 484 aaKnown RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
SLIRP-211ENST00000557623 SEC24CP53992 1094 aa11.19□□□□□ -0.62
SLIRP-211ENST00000557623 RAC3P60763 192 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms