RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 LSP1P33241 339 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 MAP2K6P52564 334 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 AGFG1P52594 562 aaKnown RBP11.2□□□□□ -0.62
SLIRP-209ENST00000557342 GYS2P54840 703 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 MTPNP58546 118 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 COPZ1P61923 177 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 PLAURQ03405 335 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 EPS8Q12929 822 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 CYP51A1Q16850 503 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 REP15Q6BDI9 236 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 SPATA21Q7Z572 469 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 SNX32Q86XE0 403 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 SLC30A8Q8IWU4 369 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 DMRTC2Q8IXT2 367 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-209ENST00000557342 GCNT2Q8N0V5 402 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 CNEP1R1Q8N9A8 125 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 C11orf65Q8NCR3 313 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 ATP6V1C2Q8NEY4 427 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 BHLHE22Q8NFJ8 381 aaPredicted RBP11.2□□□□□ -0.62
SLIRP-209ENST00000557342 SLC35B4Q969S0 331 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 ZNF524Q96C55 264 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 ELAC2Q9BQ52 826 aaKnown RBP11.2□□□□□ -0.62
SLIRP-209ENST00000557342 CCDC106Q9BWC9 280 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 GID8Q9NWU2 228 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 JKAMPQ9P055 326 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 CHRNA9Q9UGM1 479 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 ADAM21Q9UKJ8 722 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 PACSIN3Q9UKS6 424 aa11.2□□□□□ -0.62
SLIRP-209ENST00000557342 CACNA1DQ01668 2161 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 LOC100653049A0A140TA62 436 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 GMNCA6NCL1 334 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 PRORSD1PA6NEY8 169 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 AP3D1O14617 1153 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 MRASO14807 208 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SHOX2O60902 331 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SERPINB7O75635 380 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 TNFSF13O75888 250 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 KRT34O76011 436 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 PLGP00747 810 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SHC1P29353 583 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 PRKAR1BP31321 381 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 UQCRC1P31930 480 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SLC1A3P43003 542 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 CLK1P49759 484 aaKnown RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 POLR2HP52434 150 aaKnown RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SEC24CP53992 1094 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 RAC3P60763 192 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 GNGT1P63211 74 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 CAPRIN1Q14444 709 aaKnown RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 ZNF239Q16600 458 aaKnown RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SYT14P1Q58G82 188 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 NET1Q7Z628 596 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 SERPINA11Q86U17 422 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 KIF18BQ86Y91 864 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 MCEMP1Q8IX19 187 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 C10orf111Q8N326 155 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 OR8J3Q8NGG0 315 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 RP9Q8TA86 221 aaKnown RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 LRRC58Q96CX6 371 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 GMPPAQ96IJ6 420 aaPredicted RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 KAT8Q9H7Z6 458 aaKnown RBP11.19□□□□□ -0.62
SLIRP-209ENST00000557342 EVA1AQ9H8M9 152 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 CTPS2Q9NRF8 586 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 RLIMQ9NVW2 624 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 EMC9Q9Y3B6 208 aa11.19□□□□□ -0.62
SLIRP-209ENST00000557342 MPDZO75970 2070 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 MSTNO14793 375 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ZNF208O43345 1280 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ADAM11O75078 769 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 AQP8O94778 261 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 GKN3PP0CG01 181 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 TFPIP10646 304 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ACAA2P42765 397 aaKnown RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 KIR2DL2P43627 348 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 CPA2P48052 419 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 CTBP2P56545 445 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 CSNK2A1P68400 391 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 SELPLGQ14242 412 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 RNPS1Q15287 305 aaKnown RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ADRM1Q16186 407 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 INTS11Q5TA45 600 aaKnown RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 NANOGP8Q6NSW7 305 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 DHRS4L2Q6PKH6 230 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 TMPPEQ6ZT21 453 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 FAM214BQ7L5A3 538 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 GDF7Q7Z4P5 450 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ADGRG3Q86Y34 549 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 SLC43A2Q8N370 569 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 OR10A6Q8NH74 314 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 DDIT4LQ96D03 193 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 STARD4Q96DR4 205 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 OR5B2Q96R09 309 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 ECSITQ9BQ95 431 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 TACO1Q9BSH4 297 aaKnown RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 RBM24Q9BX46 236 aaKnown RBP11.18□□□□□ -0.62
SLIRP-209ENST00000557342 FAM107BQ9H098 131 aa11.18□□□□□ -0.62
SLIRP-209ENST00000557342 COQ10BQ9H8M1 238 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms