RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 IFNA7P01567 189 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 PTHLHP12272 177 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 LAMP2P13473 410 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 BMP8BP34820 402 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 NAA10P41227 235 aaPredicted RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 DUSP8Q13202 625 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 NOGQ13253 232 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 KLF9Q13886 244 aaPredicted RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 IRF4Q15306 451 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 ARHGAP11BQ3KRB8 267 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 LINGO2Q7L985 606 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 CHMP1BQ7LBR1 199 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 BMP8AQ7Z5Y6 402 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 OR4E2Q8NGC2 313 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 LGALS14Q8TCE9 139 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 HAVCR2Q8TDQ0 301 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 HGDQ93099 445 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
SRP54-213ENST00000556994 NUP50Q9UKX7 468 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 TBX21Q9UL17 535 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 RCE1Q9Y256 329 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 NPFFR2Q9Y5X5 522 aa10.53□□□□□ -0.72
SRP54-213ENST00000556994 TBC1D3KA0A087X1G2 549 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 TBC1D3FA6NER0 549 aaPredicted RBP10.52□□□□□ -0.72
SRP54-213ENST00000556994 ZNF860A6NHJ4 632 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 PSMD9O00233 223 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 FLRT2O43155 660 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 LYPD3O95274 346 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 UBL4AP11441 157 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 PEPDP12955 493 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 SLC2A5P22732 501 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 DRD3P35462 400 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 PSMB10P40306 273 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 VEGFCP49767 419 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 GDI2P50395 445 aaKnown RBP10.52□□□□□ -0.72
SRP54-213ENST00000556994 ARFIP1P53367 373 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 PITPNAQ00169 270 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 ARHGEF6Q15052 776 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 TRAM1Q15629 374 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 DEFB134Q4QY38 66 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 HES5Q5TA89 166 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 TBC1D3GQ6DHY5 549 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 FAAP20Q6NZ36 180 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 CDK20Q8IZL9 346 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 CMTM4Q8IZR5 234 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 MS4A15Q8N5U1 240 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 ZNF614Q8N883 585 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 SDR9C7Q8NEX9 313 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 OR56B4Q8NH76 319 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 WDR89Q96FK6 387 aaPredicted RBP10.52□□□□□ -0.72
SRP54-213ENST00000556994 DDOQ99489 341 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 TEX101Q9BY14 249 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 RNF208Q9H0X6 261 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 KCMF1Q9P0J7 381 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 SCP2D1Q9UJQ7 156 aa10.52□□□□□ -0.72
SRP54-213ENST00000556994 TRBV23OR9-2A0A075B6M9 112 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 TEX51A0A1B0GUA7 166 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 A0A1B0GVI7 797 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 CARNS1A5YM72 827 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 C1QTNF3-AMACRE9PGA6 284 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 GNB5O14775 395 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 LDB3O75112 727 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 FGF19O95750 216 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 TFP02787 698 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 POLR2CP19387 275 aaPredicted RBP10.52□□□□□ -0.73
SRP54-213ENST00000556994 BLVRAP53004 296 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 CLDN12P56749 244 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 TAS2R43P59537 309 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 FGL2Q14314 439 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 GAB4Q2WGN9 574 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 GARNL3Q5VVW2 1013 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 HACD4Q5VWC8 232 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 ZC3H14Q6PJT7 736 aaKnown RBP10.52□□□□□ -0.73
SRP54-213ENST00000556994 VN1R4Q7Z5H5 301 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 SPRED2Q7Z698 418 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 CDH24Q86UP0 819 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 MFSD9Q8NBP5 474 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 SRFBP1Q8NEF9 429 aaKnown RBP10.52□□□□□ -0.73
SRP54-213ENST00000556994 TOR1AIP2Q8NFQ8 470 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 OR11G2Q8NGC1 345 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 OR4K13Q8NH42 304 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 MARVELD3Q96A59 401 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 PELI1Q96FA3 418 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 PTCHD1Q96NR3 888 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 SEC22CQ9BRL7 303 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 SLC25A18Q9H1K4 315 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 IL21RQ9HBE5 538 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 INPP5EQ9NRR6 644 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 COPZ2Q9P299 210 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 KLK11Q9UBX7 282 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 CAMK2AQ9UQM7 478 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 PRELID1Q9Y255 219 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 SLC35A3Q9Y2D2 325 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 MED31Q9Y3C7 131 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 REV3LO60673 3130 aa10.52□□□□□ -0.73
SRP54-213ENST00000556994 M0R233 179 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 CDK2AP1O14519 115 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 IMPA2O14732 288 aa10.51□□□□□ -0.73
SRP54-213ENST00000556994 SPTBP11277 2137 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms