RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 FOXF2Q12947 444 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 SNTB1Q13884 538 aaKnown RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 CYP51A1Q16850 503 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 TMEM176BQ3YBM2 270 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 SLC25A53Q5H9E4 307 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 RPS26P11Q5JNZ5 115 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF550Q7Z398 422 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 GRINAQ7Z429 371 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 DMRTC2Q8IXT2 367 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 OSTF1Q92882 214 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ZG16BQ96DA0 208 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ZHX1-C8orf76Q96EF9 292 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 OR5B2Q96R09 309 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 RNF122Q9H9V4 155 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 GLRX2Q9NS18 164 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ACER3Q9NUN7 267 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 SLC25A37Q9NYZ2 338 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 VAPAQ9P0L0 249 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 KCNN3Q9UGI6 736 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 PROCRQ9UNN8 238 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ANGPT4Q9Y264 503 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 ZNF443Q9Y2A4 671 aaPredicted RBP12.65□□□□□ -0.38
SLIRP-207ENST00000556831 TACC2O95359 2948 aa12.65□□□□□ -0.38
SLIRP-207ENST00000556831 DSPPQ9NZW4 1301 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 NIPBLQ6KC79 2804 aaeCLIP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 A0A0J9YW62 118 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 CLDN24A6NM45 220 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 SYT5O00445 386 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 FAM107AO95990 144 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 IL11P20809 199 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 RPS4Y1P22090 263 aaKnown RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 LSP1P33241 339 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 KIR2DL3P43628 341 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 IDH2P48735 452 aaKnown RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 CSNK2A1P68400 391 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 RNPS1Q15287 305 aaKnown RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 FBXL19-AS1Q494R0 122 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF311Q5JNZ3 666 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 RNF220Q5VTB9 566 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 AP1ARQ63HQ0 302 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF836Q6ZNA1 936 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 PLEKHM3Q6ZWE6 761 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 STK32CQ86UX6 486 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 NFKBIDQ8NI38 313 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 CNOT9Q92600 299 aaKnown RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 MAL2Q969L2 176 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 GMPPAQ96IJ6 420 aaPredicted RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 SLC39A3Q9BRY0 314 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF385DQ9H6B1 395 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 DNAJB12Q9NXW2 375 aaKnown RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 CHRNA9Q9UGM1 479 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
SLIRP-207ENST00000556831 ANKHD1Q8IWZ3 2542 aaKnown RBP12.64□□□□□ -0.39
SLIRP-207ENST00000556831 CDHR4A6H8M9 788 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 PRORSD1PA6NEY8 169 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 BBIP1A8MTZ0 92 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 ETV2O00321 342 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-207ENST00000556831 MSTNO14793 375 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 NUDT7P0C024 238 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 ARAFP10398 606 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 BMP2P12643 396 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 IGFBP2P18065 325 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 POLR2HP52434 150 aaKnown RBP12.63□□□□□ -0.39
SLIRP-207ENST00000556831 NCALDP61601 193 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 CDK6Q00534 326 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 SORDQ00796 357 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 TLE4Q04727 773 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 CYLC2Q14093 348 aaPredicted RBP12.63□□□□□ -0.39
SLIRP-207ENST00000556831 SCARB2Q14108 478 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF239Q16600 458 aaKnown RBP12.63□□□□□ -0.39
SLIRP-207ENST00000556831 CTU2Q2VPK5 515 aaKnown RBP12.63□□□□□ -0.39
SLIRP-207ENST00000556831 SYT14P1Q58G82 188 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 TMEM201Q5SNT2 666 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 FBXW10Q5XX13 1052 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 REEP3Q6NUK4 255 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 FAM214BQ7L5A3 538 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 TMEM200AQ86VY9 491 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 VRK2Q86Y07 508 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF295-AS1Q8N0V1 137 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 CADM2Q8N3J6 435 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 DPP10Q8N608 796 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 PCYOX1LQ8NBM8 494 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 ZNF524Q96C55 264 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 DDIT4LQ96D03 193 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 C14orf79Q96F83 325 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 ADGRG7Q96K78 797 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 CGREF1Q99674 301 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 SH3GL1Q99961 368 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 SPATA9Q9BWV2 254 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 TRIM8Q9BZR9 551 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 BCL2L10Q9HD36 194 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 KLHL28Q9NXS3 571 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 SLAMF8Q9P0V8 285 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 RPS6KB2Q9UBS0 482 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 MED13LQ71F56 2210 aa12.63□□□□□ -0.39
SLIRP-207ENST00000556831 INTS1Q8N201 2190 aaKnown RBP12.63□□□□□ -0.39
SLIRP-207ENST00000556831 TUBAL3A6NHL2 446 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 SULT2B1O00204 365 aa12.62□□□□□ -0.39
SLIRP-207ENST00000556831 CCDC22O60826 627 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms