RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ELAVL3Q14576 367 aaKnown RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 GINS1Q14691 196 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 LARS2Q15031 903 aaKnown RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 MLC1Q15049 377 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TEAD2Q15562 447 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TRAM1Q15629 374 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 SSX1Q16384 188 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM35AQ53FP2 167 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF311Q5JNZ3 666 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 C6orf183Q5T699 404 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 PRAMEF8Q5VWM4 474 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 PRAMEF7Q5VXH5 474 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 LIPKQ5VXJ0 399 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF57Q68EA5 555 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 C22orf42Q6IC83 251 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ADNP2Q6IQ32 1131 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 PODNL1Q6PEZ8 512 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 METAP1DQ6UB28 335 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM64Q6YI46 380 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RTL10Q7L3V2 364 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 GDPD3Q7L5L3 318 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 NRARPQ7Z6K4 114 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TECPR1Q7Z6L1 1165 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 C11orf96Q7Z7L8 435 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 LUZP2Q86TE4 346 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RANBP3LQ86VV4 465 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 AMZ2Q86W34 360 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM25Q86YD3 366 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 MYO18BQ8IUG5 2567 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 PHC2Q8IXK0 858 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 NANOGP1Q8N7R0 232 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 PSD4Q8NDX1 1056 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 SRFBP1Q8NEF9 429 aaKnown RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 IL17RDQ8NFM7 739 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TOR1AIP2Q8NFQ8 470 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 OR4K5Q8NGD3 323 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 OR52I1Q8NGK6 324 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TMEM163Q8TC26 289 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 SLC38A5Q8WUX1 472 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ACOT12Q8WYK0 555 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 OSTF1Q92882 214 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RAB8BQ92930 207 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 SLC25A46Q96AG3 418 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RAB7BQ96AH8 199 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 C1GALT1C1Q96EU7 318 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 C11orf24Q96F05 449 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 MRPL48Q96GC5 212 aaKnown RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF462Q96JM2 2506 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 LMLNQ96KR4 655 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 LRR1Q96L50 414 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 LINC00615Q96LM1 132 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 OR2A14Q96R47 310 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 AIFM2Q9BRQ8 373 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 MED18Q9BUE0 208 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ACAT2Q9BWD1 397 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 C1QTNF7Q9BXJ2 289 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 PINK1Q9BXM7 581 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 HDHD2Q9H0R4 259 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ZBP1Q9H171 429 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RHBGQ9H310 441 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 OR51I1Q9H343 314 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TP63Q9H3D4 680 aaPredicted RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TPK1Q9H3S4 243 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 OSGEPL1Q9H4B0 414 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ANKRD19PQ9H560 264 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RERGLQ9H628 205 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RNF167Q9H6Y7 350 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 NT5DC2Q9H857 520 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RNF121Q9H920 327 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 MARCH7Q9H992 704 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RMI1Q9H9A7 625 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 HHATLQ9HCP6 504 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 FZD3Q9NPG1 666 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 WASH6PQ9NQA3 447 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TRPV5Q9NQA5 729 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 RPRD1BQ9NQG5 326 aaKnown RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 TXNL4BQ9NX01 149 aaKnown RBP4.08□□□□□ -1.76
ATXN3-241ENST00000556374 FBXL12Q9NXK8 326 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 DSPPQ9NZW4 1301 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 POU2F3Q9UKI9 436 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 FBXO4Q9UKT5 387 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 HECTD1Q9ULT8 2610 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 CLEC4EQ9ULY5 219 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 GPR34Q9UPC5 381 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 POLHQ9Y253 713 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ENTPD2Q9Y5L3 495 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 WNT6Q9Y6F9 365 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 ZNF780BQ9Y6R6 833 aa4.08□□□□□ -1.76
ATXN3-241ENST00000556374 DENND4CQ5VZ89 1909 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 AKAP13Q12802 2813 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 A0A0G2JPF8 293 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 A0A1W2PQL4 384 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-241ENST00000556374 A0A1W2PS29 197 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 A8MU76 341 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HNRNPCL2B2RXH8 293 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 GPR89AB7ZAQ6 455 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 HNRNPCL3B7ZW38 293 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 FAM227AF5H4B4 570 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 SYT5O00445 386 aa4.07□□□□□ -1.76
ATXN3-241ENST00000556374 CTDSP2O14595 271 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms