RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TAS2R10Q9NYW0 307 aa9.28□□□□□ -0.92
SRP54-208ENST00000555557 SELENONQ9NZV5 590 aa9.28□□□□□ -0.92
SRP54-208ENST00000555557 CNIH4Q9P003 139 aa9.28□□□□□ -0.92
SRP54-208ENST00000555557 LRRC42Q9Y546 428 aa9.28□□□□□ -0.92
SRP54-208ENST00000555557 EML6Q6ZMW3 1958 aa9.28□□□□□ -0.92
SRP54-208ENST00000555557 ANKUB1A6NFN9 424 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 SLC25A12O75746 678 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 CLIC3O95833 236 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 HPRP00739 348 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ANXA8P13928 327 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 EPHA2P29317 976 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 CASRP41180 1078 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 GPR4P46093 362 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 MASP1P48740 699 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 FOXK1P85037 733 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 TMEM81Q6P7N7 255 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 MBOAT2Q6ZWT7 520 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ATG4DQ86TL0 474 aaPredicted RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 OR2M3Q8NG83 312 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 OR4K17Q8NGC6 315 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 DNAJA4Q8WW22 397 aaPredicted RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 NTNG2Q96CW9 530 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 DNAJA3Q96EY1 480 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 MBOAT4Q96T53 435 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 TSC22D3Q99576 134 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 YIPF3Q9GZM5 350 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ADAM19Q9H013 955 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 TOR3AQ9H497 397 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 MEPEQ9NQ76 525 aaPredicted RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 KLHL1Q9NR64 748 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 SACM1LQ9NTJ5 587 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 OSGIN1Q9UJX0 560 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 SSUH2Q9Y2M2 353 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 CSAG2Q9Y5P2 127 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 A0A087WUJ7 227 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 IGLV3-32A0A0A0MS00 114 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 PINLYPA6NC86 204 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ELOA3DA6NLF2 546 aaPredicted RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 IGFBP1P08833 259 aaPredicted RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 GP1BBP13224 206 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 FUT1P19526 365 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 OMPP47874 163 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ROR2Q01974 943 aaKnown RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 MERTKQ12866 999 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 GK3PQ14409 553 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 TAF11Q15544 211 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ELOA3BQ3SY89 546 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 C1orf94Q6P1W5 598 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 KLHL17Q6TDP4 642 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 LINC00114Q6XXX2 140 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 Q6ZPB1 254 aaPredicted RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 PLCZ1Q86YW0 608 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 GPALPP1Q8IXQ4 340 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 FADS6Q8N9I5 356 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ELOA3Q8NG57 546 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 OR5M1Q8NGP8 315 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 OR1J4Q8NGS1 313 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ZFAND2BQ8WV99 257 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 CYGBQ8WWM9 190 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 MPP4Q96JB8 637 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 PSD2Q9BQI7 771 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 RIBC2Q9H4K1 309 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 ZNF556Q9HAH1 456 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 C8orf4Q9NR00 106 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 PAPOLBQ9NRJ5 636 aaKnown RBP9.27□□□□□ -0.93
SRP54-208ENST00000555557 MED17Q9NVC6 651 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 RAXQ9Y2V3 346 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 AP4B1Q9Y6B7 739 aa9.27□□□□□ -0.93
SRP54-208ENST00000555557 CACNA1BQ00975 2339 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 IGKV1D-42A0A075B6H8 117 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 OR5H15A6NDH6 313 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 ARRDC5A6NEK1 342 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 C1QTNF9BB2RNN3 333 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 LRRN3E7EW58 273 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 H0YJX3 145 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 CDC42EP2O14613 210 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 SNPHO15079 494 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 SNX4O95219 450 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 SOX14O95416 240 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 GNAO1P09471 354 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 C1QTNF9P0C862 333 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 IFI30P13284 250 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 PRKCAP17252 672 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 MAKP20794 623 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 CNR1P21554 472 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 MSX1P28360 303 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 RFC3P40938 356 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 ARG2P78540 354 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 ALDH6A1Q02252 535 aaKnown RBP9.26□□□□□ -0.93
SRP54-208ENST00000555557 TLE3Q04726 772 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 MFAP5Q13361 173 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 TIGD3Q6B0B8 471 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 TTC33Q6PID6 262 aaPredicted RBP9.26□□□□□ -0.93
SRP54-208ENST00000555557 ADGRG3Q86Y34 549 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 DRAXINQ8NBI3 349 aaPredicted RBP9.26□□□□□ -0.93
SRP54-208ENST00000555557 PIGXQ8TBF5 258 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 TFAP2CQ92754 450 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 ZNF426Q9BUY5 554 aa9.26□□□□□ -0.93
SRP54-208ENST00000555557 ADI1Q9BV57 179 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms