RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 MOSP00540 346 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 ALPPP05187 535 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 CD5P06127 495 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 ATP6V1B2P21281 511 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 OAS2P29728 719 aaKnown RBP2.08□□□□□ -2.08
SCFD1-216ENST00000555550 TGFBR3Q03167 851 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 MAPK6Q16659 721 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 LINC00483Q53H64 154 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 PIGGQ5H8A4 983 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 CCDC137Q6PK04 289 aaKnown RBP2.08□□□□□ -2.08
SCFD1-216ENST00000555550 ACOT7LQ6ZUV0 252 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 C6orf120Q7Z4R8 191 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 TMEM17Q86X19 198 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 TTC5Q8N0Z6 440 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 RNF182Q8N6D2 247 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 C15orf54Q8N8G6 183 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 OR5AU1Q8NGC0 362 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 FANK1Q8TC84 345 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 TCTEX1D2Q8WW35 142 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 SELENOMQ8WWX9 145 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 CHCHD10Q8WYQ3 142 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-216ENST00000555550 RAPGEF5Q92565 580 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 ALDH8A1Q9H2A2 487 aaPredicted RBP2.08□□□□□ -2.08
SCFD1-216ENST00000555550 RHOJQ9H4E5 214 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 ACTR8Q9H981 624 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 IL19Q9UHD0 177 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 PLEKHH1Q9ULM0 1364 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 PDS5BQ9NTI5 1447 aa2.08□□□□□ -2.08
SCFD1-216ENST00000555550 F10P00742 488 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 RBMY1CP0DJD4 496 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 ANXA13P27216 316 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 TFPI2P48307 235 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 MNAT1P51948 309 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 BIDP55957 195 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 RAB40BQ12829 278 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 DEFB116Q30KQ4 102 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 UNC5DQ6UXZ4 953 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 CENPUQ71F23 418 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 KDM8Q8N371 416 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 NKAPP1Q8N9T2 125 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 OR51G2Q8NGK0 314 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 AKR1E2Q96JD6 320 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 TSNARE1Q96NA8 513 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 NAT10Q9H0A0 1025 aaKnown RBP2.07□□□□□ -2.08
SCFD1-216ENST00000555550 RAB17Q9H0T7 212 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 DHX33Q9H6R0 707 aaKnown RBP2.07□□□□□ -2.08
SCFD1-216ENST00000555550 VCPKMTQ9H867 229 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 ZDHHC4Q9NPG8 344 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 RBAKQ9NYW8 714 aaPredicted RBP2.07□□□□□ -2.08
SCFD1-216ENST00000555550 KIF25Q9UIL4 384 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 UBE4BO95155 1302 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 CUX2O14529 1486 aa2.07□□□□□ -2.08
SCFD1-216ENST00000555550 KIF26AQ9ULI4 1882 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 A0A1B0GUL7 405 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 ICAM2P13598 275 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 IGFBP3P17936 291 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 PAICSP22234 425 aaKnown RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 KIF5BP33176 963 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 KLK7P49862 253 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 ACTA2P62736 377 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 ACTC1P68032 377 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 AP1B1Q10567 949 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 PDK1Q15118 436 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 TRIP10Q15642 601 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 XKR4Q5GH76 650 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 C1QTNF12Q5T7M4 302 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 IGFL1Q6UW32 110 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 RFLNAQ6ZTI6 216 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 RALGPS2Q86X27 583 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 CBWD2Q8IUF1 395 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 ZNF695Q8IW36 515 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 BCORP1Q8N888 145 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 OR51S1Q8NGJ8 323 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 OR56B4Q8NH76 319 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 PNPT1Q8TCS8 783 aaKnown RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 NDRG1Q92597 394 aaKnown RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 RPL3LQ92901 407 aaKnown RBP2.06□□□□□ -2.08
SCFD1-216ENST00000555550 VPS35Q96QK1 796 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 HIST1H4GQ99525 98 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 OR11A1Q9GZK7 315 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 CALHM2Q9HA72 323 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 DEC1Q9P2X7 70 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 SPASTQ9UBP0 616 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 TRAF3IP3Q9Y228 551 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 ZNF835Q9Y2P0 537 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 V9GY05 133 aa2.06□□□□□ -2.08
SCFD1-216ENST00000555550 PPIAL4EA0A075B759 164 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PPIAL4CA0A0B4J2A2 164 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 A6NIZ1 184 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PPIAL4DF5H284 164 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PRKYO43930 277 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 IGLV3-19P01714 112 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 MRPL3P09001 348 aaKnown RBP2.05□□□□□ -2.08
SCFD1-216ENST00000555550 CHTF8P0CG12 524 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 ZNF286BP0CG31 522 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PPIAL4FP0DN26 164 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 ETS1P14921 441 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 UQCRC2P22695 453 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 CD80P33681 288 aa2.05□□□□□ -2.08
SCFD1-216ENST00000555550 PTGFRP43088 359 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms