RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 LUZP2Q86TE4 346 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 VRK2Q86Y07 508 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 PCYOX1LQ8NBM8 494 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 ADGRG7Q96K78 797 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 ZNF317Q96PQ6 595 aaPredicted RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 OR5B2Q96R09 309 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 SH3GL1Q99961 368 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 CPPED1Q9BRF8 314 aaPredicted RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 RBM24Q9BX46 236 aaKnown RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 ENKD1Q9H0I2 346 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 RNF122Q9H9V4 155 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 BCL2L10Q9HD36 194 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 SAR1AQ9NR31 198 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 GLRX2Q9NS18 164 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 CHRNA9Q9UGM1 479 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 CREBBPQ92793 2442 aa10.86□□□□□ -0.67
SRP54-206ENST00000555317 ANKRD17O75179 2603 aaKnown RBP10.86□□□□□ -0.67
SRP54-206ENST00000555317 MPDZO75970 2070 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 TRBV5-3A0A0A0MS03 114 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 PRORSD1PA6NEY8 169 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 SYT5O00445 386 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 MRASO14807 208 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 SLC22A2O15244 555 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 CCDC22O60826 627 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 BCAS1O75363 584 aaPredicted RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 SERPINB7O75635 380 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 AQP8O94778 261 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 PGM3O95394 542 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 ETS2P15036 469 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 CD1EP15812 388 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 GPX2P18283 190 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 FKBP2P26885 142 aaKnown RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 SHC1P29353 583 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 ADSLP30566 484 aaPredicted RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 SLC1A3P43003 542 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 KCNJ5P48544 419 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 POLR2HP52434 150 aaKnown RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 MTPNP58546 118 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 CSNK2A1P68400 391 aaPredicted RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 EPS8Q12929 822 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 KLF10Q13118 480 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 RNPS1Q15287 305 aaKnown RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 MAPK11Q15759 364 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 ZNF239Q16600 458 aaKnown RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 FBXL19-AS1Q494R0 122 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 SYT14P1Q58G82 188 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 RUNDC3AQ59EK9 446 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 COQ5Q5HYK3 327 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 SPATA21Q7Z572 469 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 CPLX4Q7Z7G2 160 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 SNX32Q86XE0 403 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 DMRTC2Q8IXT2 367 aaPredicted RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 CADM2Q8N3J6 435 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 C11orf65Q8NCR3 313 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 C10orf82Q8WW14 230 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 DDIT4LQ96D03 193 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 ZHX1-C8orf76Q96EF9 292 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 GMPPAQ96IJ6 420 aaPredicted RBP10.85□□□□□ -0.67
SRP54-206ENST00000555317 ANKRD27Q96NW4 1050 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 ZNF559Q9BR84 538 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 SPATA9Q9BWV2 254 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 TMEM38AQ9H6F2 299 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 CTPS2Q9NRF8 586 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 RLIMQ9NVW2 624 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 GID8Q9NWU2 228 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 PROCRQ9UNN8 238 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 GMEB1Q9Y692 573 aa10.85□□□□□ -0.67
SRP54-206ENST00000555317 A0A1W2PNR3 127 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 SULT2B1O00204 365 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 FAAHO00519 579 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 AP3D1O14617 1153 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 MSTNO14793 375 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 TNFSF13O75888 250 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 GKN3PP0CG01 181 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 IGFBP2P18065 325 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 CCNA2P20248 432 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 CXCR1P25024 350 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 AQP1P29972 269 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 KIR2DL3P43628 341 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 NCALDP61601 193 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 CAPRIN1Q14444 709 aaKnown RBP10.84□□□□□ -0.67
SRP54-206ENST00000555317 REP15Q6BDI9 236 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 WBP2NLQ6ICG8 309 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 VWA1Q6PCB0 445 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 FCRLAQ7L513 359 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 FAM214BQ7L5A3 538 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 STK32CQ86UX6 486 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 ARMC8Q8IUR7 673 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 SLC30A8Q8IWU4 369 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 HIPK4Q8NE63 616 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 BHLHE22Q8NFJ8 381 aaPredicted RBP10.84□□□□□ -0.67
SRP54-206ENST00000555317 ROBO4Q8WZ75 1007 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 ELAC2Q9BQ52 826 aaKnown RBP10.84□□□□□ -0.67
SRP54-206ENST00000555317 SLC39A3Q9BRY0 314 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 CCDC106Q9BWC9 280 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 TRIM8Q9BZR9 551 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 IKZF5Q9H5V7 419 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 FANCFQ9NPI8 374 aa10.84□□□□□ -0.67
SRP54-206ENST00000555317 KLHL28Q9NXS3 571 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms