RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 OR11G2Q8NGC1 345 aa15.98■□□□□ 0.15
SHOX-204ENST00000554971 WDR77Q9BQA1 342 aaPredicted RBP15.98■□□□□ 0.15
SHOX-204ENST00000554971 WFDC6Q9BQY6 131 aa15.98■□□□□ 0.15
SHOX-204ENST00000554971 POLR2J2Q9GZM3 115 aaKnown RBP15.98■□□□□ 0.15
SHOX-204ENST00000554971 SLC38A1Q9H2H9 487 aa15.98■□□□□ 0.15
SHOX-204ENST00000554971 FGF20Q9NP95 211 aaPredicted RBP15.98■□□□□ 0.15
SHOX-204ENST00000554971 DNAJC27Q9NZQ0 273 aa15.98■□□□□ 0.15
SHOX-204ENST00000554971 MRPS33Q9Y291 106 aaKnown RBP15.98■□□□□ 0.15
SHOX-204ENST00000554971 MMACHCQ9Y4U1 282 aa15.98■□□□□ 0.15
SHOX-204ENST00000554971 SPACA6W5XKT8 324 aa15.98■□□□□ 0.15
SHOX-204ENST00000554971 LOC102723996A0A087X1L8 192 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 A0A1W2PQ72 361 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 MYL12BO14950 172 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 TLX2O43763 284 aaPredicted RBP15.97■□□□□ 0.15
SHOX-204ENST00000554971 IFI6P09912 130 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 DEFA1P59665 94 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 DEFA3P59666 94 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 SYT14P1Q58G82 188 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 SLC27A4Q6P1M0 643 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 TMEM107Q6UX40 140 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 ANKRD37Q7Z713 158 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 CCDC190Q86UF4 302 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 SLC22A16Q86VW1 577 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 PARP16Q8N5Y8 322 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 TEX47Q8TBZ9 253 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 TMEM163Q8TC26 289 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 NACC2Q96BF6 587 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 SLC38A2Q96QD8 506 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 MTHFD2LQ9H903 347 aaPredicted RBP15.97■□□□□ 0.15
SHOX-204ENST00000554971 CACYBPQ9HB71 228 aaKnown RBP15.97■□□□□ 0.15
SHOX-204ENST00000554971 TRAPPC4Q9Y296 219 aa15.97■□□□□ 0.15
SHOX-204ENST00000554971 CDC14CA4D256 554 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 BOLA2-SMG1P6H3BVE0 249 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 CLDN4O14493 209 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 PRODHO43272 600 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 GPX5O75715 221 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 CYC1P08574 325 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 COX6A1P12074 109 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 TLX1P31314 330 aaPredicted RBP15.96■□□□□ 0.15
SHOX-204ENST00000554971 FEN1P39748 380 aaKnown RBP15.96■□□□□ 0.15
SHOX-204ENST00000554971 TMPRSS3P57727 454 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 TAS2R41P59536 307 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 IGLV3-21P80748 117 aaPredicted RBP15.96■□□□□ 0.15
SHOX-204ENST00000554971 DECR1Q16698 335 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 ZNF750Q32MQ0 723 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 RRM2BQ7LG56 351 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 COMTD1Q86VU5 262 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 PMM1Q92871 262 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 ZNF582Q96NG8 517 aaPredicted RBP15.96■□□□□ 0.15
SHOX-204ENST00000554971 MED17Q9NVC6 651 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 P4HTMQ9NXG6 502 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 TAS2R16Q9NYV7 291 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 SSR3Q9UNL2 185 aa15.96■□□□□ 0.15
SHOX-204ENST00000554971 TMEM129A0AVI4 362 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 ZNF670-ZNF695F2Z2N8 137 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 PRKYO43930 277 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 ADRA2AP08913 450 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 ACP2P11117 423 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 MYL12AP19105 171 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 RORCP51449 518 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 DUSP2Q05923 314 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 PCOLCEQ15113 449 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 CDC73Q6P1J9 531 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 C16orf62Q7Z3J2 963 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 EGFL6Q8IUX8 553 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 LRRC25Q8N386 305 aaPredicted RBP15.96■□□□□ 0.14
SHOX-204ENST00000554971 ADAMTS15Q8TE58 950 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 OTUB1Q96FW1 271 aaPredicted RBP15.96■□□□□ 0.14
SHOX-204ENST00000554971 MS4A4EQ96PG1 132 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 ASPNQ9BXN1 380 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 PTGFRNQ9P2B2 879 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 ZNF232Q9UNY5 417 aa15.96■□□□□ 0.14
SHOX-204ENST00000554971 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 A0A087WUU8 490 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 IGHV1-45A0A0A0MS14 117 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 BLACEA4D250 179 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 OR5F1O95221 314 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 IGFBP1P08833 259 aaPredicted RBP15.95■□□□□ 0.14
SHOX-204ENST00000554971 CPEP16870 476 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 MC3RP41968 323 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 CRYBB2P43320 205 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 UCNP55089 124 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 SNAPC1Q16533 368 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 DGAT2L6Q6ZPD8 337 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 CADM3Q8N126 398 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 PIGXQ8TBF5 258 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 ACOT11Q8WXI4 607 aaPredicted RBP15.95■□□□□ 0.14
SHOX-204ENST00000554971 DIO2Q92813 273 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 OSTF1Q92882 214 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 RFKQ969G6 155 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 GIMAP5Q96F15 307 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 C16orf58Q96GQ5 468 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 LRR1Q96L50 414 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 ARMC7Q9H6L4 198 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 EVA1AQ9H8M9 152 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 KRCC1Q9NPI7 259 aaPredicted RBP15.95■□□□□ 0.14
SHOX-204ENST00000554971 ABCB10Q9NRK6 738 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 EXOSC1Q9Y3B2 195 aaKnown RBP15.95■□□□□ 0.14
SHOX-204ENST00000554971 PCDHGB6Q9Y5F9 930 aa15.95■□□□□ 0.14
SHOX-204ENST00000554971 SLC35F4A4IF30 521 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms