RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RBBP4Q09028 425 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 VEZF1Q14119 521 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SELPLGQ14242 412 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GANABQ14697 944 aaKnown RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 RCN1Q15293 331 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GRAMD1BQ3KR37 738 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GTDC1Q4AE62 458 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 CYP27C1Q4G0S4 372 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 Q5PR19 223 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 EEF1A1P5Q5VTE0 462 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 ANKRD26P1Q6NSI1 321 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 DNAJC14Q6Y2X3 702 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF551Q7Z340 670 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GGNQ86UU5 652 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SPATA24Q86W54 205 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 MICU2Q8IYU8 434 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 CLECL1Q8IZS7 167 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 FAM156AQ8NDB6 213 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 OR10A6Q8NH74 314 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SFXN5Q8TD22 340 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 DUSP19Q8WTR2 217 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 HOXB13Q92826 284 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 ELP4Q96EB1 424 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 ARSGQ96EG1 525 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 PIK3IP1Q96FE7 263 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 RSRC1Q96IZ7 334 aaKnown RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 NSMCE2Q96MF7 247 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 LMF2Q9BU23 707 aaKnown RBP9.49□□□□□ -0.89
SHMT2-215ENST00000554656 PCDHAC1Q9H158 963 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 GORASP2Q9H8Y8 452 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 SLC6A13Q9NSD5 602 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 NDRG3Q9UGV2 375 aa9.49□□□□□ -0.89
SHMT2-215ENST00000554656 USF3Q68DE3 2245 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 CASKO14936 926 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 EMC8O43402 210 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 GMFGO60234 142 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 SLITRK5O94991 958 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 UTS2O95399 124 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 GSNP06396 782 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 THBDP07204 575 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 BMP2P12643 396 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 ANPEPP15144 967 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 ATP6V1B2P21281 511 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 RFX3P48380 749 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 MANFP55145 182 aaKnown RBP9.48□□□□□ -0.89
SHMT2-215ENST00000554656 MRPS22P82650 360 aaKnown RBP9.48□□□□□ -0.89
SHMT2-215ENST00000554656 PON3Q15166 354 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 DECR1Q16698 335 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 SHEQ5VZ18 495 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 GLYATQ6IB77 296 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 OR2A2Q6IF42 318 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 ZAR1Q86SH2 424 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 GALNT10Q86SR1 603 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 SLC30A8Q8IWU4 369 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 MEIOBQ8N635 442 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 METTL25Q8N6Q8 603 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF610Q8N9Z0 462 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 NEURL3Q96EH8 262 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 DTNBP1Q96EV8 351 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 COX4I2Q96KJ9 171 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 PIP5K1AQ99755 562 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 MED18Q9BUE0 208 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 IKZF5Q9H5V7 419 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 UBTD1Q9HAC8 227 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 DDX18Q9NVP1 670 aaKnown RBP9.48□□□□□ -0.89
SHMT2-215ENST00000554656 ARMC1Q9NVT9 282 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 THUMPD1Q9NXG2 353 aaKnown RBP9.48□□□□□ -0.89
SHMT2-215ENST00000554656 ZNF175Q9Y473 711 aa9.48□□□□□ -0.89
SHMT2-215ENST00000554656 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 H3BNX3 289 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 H7C1Q1 480 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 CASQ2O14958 399 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 GSTA4O15217 222 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 LY6G6DO95868 133 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 HEXAP06865 529 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 CD8BP10966 210 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 ACP2P11117 423 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 POU2F1P14859 743 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 PSMA4P25789 261 aaKnown RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 GABRA3P34903 492 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 MSX2P35548 267 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 ANXA11P50995 505 aaKnown RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 PRR5P85299 388 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 HSPB3Q12988 150 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 RGNQ15493 299 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 VMACQ2NL98 169 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 CTU2Q2VPK5 515 aaKnown RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 SAXO2Q658L1 398 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 ANKRD34AQ69YU3 496 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 BHLHB9Q6PI77 547 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 CLEC9AQ6UXN8 241 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 FKBP9P1Q75LS8 142 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 CHMP1BQ7LBR1 199 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 LRRC75A-AS1Q8N1F1 130 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 PAPD5Q8NDF8 572 aaKnown RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 IGFBPL1Q8WX77 278 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 PYDC1Q8WXC3 89 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 PIK3R3Q92569 461 aa9.47□□□□□ -0.89
SHMT2-215ENST00000554656 CIDECQ96AQ7 238 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-215ENST00000554656 GIMAP5Q96F15 307 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms