RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 RFWD2Q8NHY2 731 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 ITCHQ96J02 903 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 WFIKKN1Q96NZ8 548 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 ALPK1Q96QP1 1244 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 OR52B2Q96RD2 323 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 MED18Q9BUE0 208 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 THUMPD3Q9BV44 507 aaKnown RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 SRXN1Q9BYN0 137 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 SLC38A1Q9H2H9 487 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 RMND5AQ9H871 391 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZFAND3Q9H8U3 227 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 PLEKHF2Q9H8W4 249 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 SERINC1Q9NRX5 453 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 KLHL13Q9P2N7 655 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 SPIN1Q9Y657 262 aaPredicted RBP9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 USH1CQ9Y6N9 552 aa9.29□□□□□ -0.92
PTCD2P1-201ENST00000554393 MAP1AP78559 2803 aaPredicted RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 FLNAP21333 2647 aaKnown RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 AGAP5A6NIR3 686 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 FAAHO00519 579 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 DNPH1O43598 174 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 CYP7B1O75881 506 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 PRKD3O94806 890 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 PSMB1P20618 241 aaKnown RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 RPS4Y1P22090 263 aaKnown RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 APOBEC1P41238 236 aaKnown RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 POLR2JP52435 117 aaKnown RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 IRX1P78414 480 aaPredicted RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 KCNJ10P78508 379 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 CHRNEQ04844 493 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 MERTKQ12866 999 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 TMEM201Q5SNT2 666 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 PLEKHM3Q6ZWE6 761 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 FCRLAQ7L513 359 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 OLIG3Q7RTU3 272 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 GRINAQ7Z429 371 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 ARFGAP2Q8N6H7 521 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 ANKFN1Q8N957 763 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 LRRC8CQ8TDW0 803 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 ABHD3Q8WU67 409 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 STON2Q8WXE9 905 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 ZNF524Q96C55 264 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 LIME1Q9H400 295 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 MTHFD2LQ9H903 347 aaPredicted RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 VIPAS39Q9H9C1 493 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 BCO1Q9HAY6 547 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 CCM2LQ9NUG4 571 aaPredicted RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 THUMPD1Q9NXG2 353 aaKnown RBP9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 KLHL28Q9NXS3 571 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 CALML5Q9NZT1 146 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 KLHL9Q9P2J3 617 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 P2RX2Q9UBL9 471 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 CLEC4AQ9UMR7 237 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 DSPPQ9NZW4 1301 aa9.28□□□□□ -0.92
PTCD2P1-201ENST00000554393 ROS1P08922 2347 aa9.27□□□□□ -0.92
PTCD2P1-201ENST00000554393 FAM234BA2RU67 622 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 DEFB108AA8MXU0 73 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 HMGB1P1B2RPK0 211 aaPredicted RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 LCE2BO14633 110 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 POLR3GO15318 223 aaPredicted RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ST8SIA5O15466 376 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 BCAS1O75363 584 aaPredicted RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ATE1O95260 518 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ANP32DO95626 131 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 C1QCP02747 245 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 GSNP06396 782 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 DBIP07108 87 aaKnown RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 YES1P07947 543 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 CHRM4P08173 479 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 NR2F1P10589 423 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 HTR3AP46098 478 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 CLK1P49759 484 aaKnown RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 MAP2K6P52564 334 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 MVDP53602 400 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 STX1BP61266 288 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 CSNK2A1P68400 391 aaPredicted RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 PLAURQ03405 335 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 SYPL1Q16563 259 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ZSWIM7Q19AV6 140 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 SYT14P1Q58G82 188 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 TTMPQ5BVD1 217 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 COX20Q5RI15 118 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 STAC2Q6ZMT1 411 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 TMPPEQ6ZT21 453 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 HDXQ7Z353 690 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ZNF440Q8IYI8 595 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 GOLGA6L1Q8N7Z2 621 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ATP6V1C2Q8NEY4 427 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ZNF563Q8TA94 476 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 WDR60Q8WVS4 1066 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ROBO4Q8WZ75 1007 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 ZG16BQ96DA0 208 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 MARK4Q96L34 752 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 OR5B2Q96R09 309 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 CCDC28BQ9BUN5 200 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 CCDC106Q9BWC9 280 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 KLHL4Q9C0H6 718 aa9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 QRSL1Q9H0R6 528 aaKnown RBP9.27□□□□□ -0.93
PTCD2P1-201ENST00000554393 TPT1P8Q9HAU6 139 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms